rDiff is an open source tool for accurate detection of differential RNA processing from RNA-Seq data. It implements two statistical tests to detect changes of the RNA processing between two samples. rDiff.parametric is a powerful test, which can be applied for well annotated organisms to detect changes in the relative abundance of isoforms. rDiff.nonparametric is an alternative when the annotation is incomplete or missing.

News & updates

Information on latest releases of rDiff, Updates and Usage of rDiff

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Obtain the lattest version of rDiff, learn more about the requirements and the software license.

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Relevant publications of rDiff, supplemental material and datasets of the rDiff publications and use cases of rDiff.

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Frequently asked questions on rDiff, its usage and common difficulties

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Examples of how to best apply rDiff in various experimental settings and sample configuration files.

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Information on the Rätschlab as well as on other tools including Shogun, Palmapper, MMR, MiTie, rquant and mGene.

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