chr1	undefined	intron_retention	54359986	54360220	.	+	.	gene_id "intron_retention.1"; transcript_id "intron_retention.1"; gene_name "ENSG00000211452.6"; flanks "54359987-,54360220^"; structure "0,1^2-"; splice_chain ",54360028^54360112-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.956984";
chr1	undefined	intron_retention	110211911	110212193	.	+	.	gene_id "intron_retention.2"; transcript_id "intron_retention.2"; gene_name "ENSG00000213366.8"; flanks "110211912-,110212193^"; structure "0,1^2-"; splice_chain ",110211993^110212093-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.407532";
chr1	undefined	intron_retention	110212257	110212856	.	+	.	gene_id "intron_retention.3"; transcript_id "intron_retention.3"; gene_name "ENSG00000213366.8"; flanks "110212258-,110212856^"; structure "0,1^2-"; splice_chain ",110212685^110212797-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.745753";
chr1	undefined	intron_retention	145578061	145578479	.	+	.	gene_id "intron_retention.4"; transcript_id "intron_retention.4"; gene_name "ENSG00000131788.11"; flanks "145578062-,145578479^"; structure "0,1^2-"; splice_chain ",145578295^145578401-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.995793";
chr1	undefined	intron_retention	145578061	145578721	.	+	.	gene_id "intron_retention.5"; transcript_id "intron_retention.5"; gene_name "ENSG00000131788.11"; flanks "145578062-,145578721^"; structure "0,1^2-"; splice_chain ",145578479^145578637-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.914339";
chr1	undefined	intron_retention	155182175	155182561	.	+	.	gene_id "intron_retention.6"; transcript_id "intron_retention.6"; gene_name "ENSG00000173171.10"; flanks "155182176-,155182561^"; structure "0,1^2-"; splice_chain ",155182358^155182485-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.241698";
chr1	undefined	intron_retention	230398667	230401113	.	+	.	gene_id "intron_retention.7"; transcript_id "intron_retention.7"; gene_name "ENSG00000143641.8"; flanks "230398668-,230401113^"; structure "0,1^2-"; splice_chain ",230398751^230400987-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.281345";
chr1	undefined	intron_retention	27425305	27427135	.	-	.	gene_id "intron_retention.8"; transcript_id "intron_retention.8"; gene_name "ENSG00000090020.6"; flanks "27427135-,27425306^"; structure "0,1^2-"; splice_chain ",27425703^27425495-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.692520";
chr1	undefined	intron_retention	41485897	41486605	.	-	.	gene_id "intron_retention.9"; transcript_id "intron_retention.9"; gene_name "ENSG00000171790.11"; flanks "41486605-,41485898^"; structure "0,1^2-"; splice_chain ",41486536^41486450-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.409100";
chr1	undefined	intron_retention	41485897	41487387	.	-	.	gene_id "intron_retention.10"; transcript_id "intron_retention.10"; gene_name "ENSG00000171790.11"; flanks "41487387-,41485898^"; structure "0,1^2-"; splice_chain ",41487288^41486450-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.448573";
chr1	undefined	intron_retention	41485897	41487387	.	-	.	gene_id "intron_retention.12"; transcript_id "intron_retention.12"; gene_name "ENSG00000171790.11"; flanks "41487387-,41485898^"; structure "0,1^2-"; splice_chain ",41487202^41486605-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.510856";
chr1	undefined	intron_retention	41485897	41487387	.	-	.	gene_id "intron_retention.13"; transcript_id "intron_retention.13"; gene_name "ENSG00000171790.11"; flanks "41487387-,41485898^"; structure "0,1^2-"; splice_chain ",41487295^41486605-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.830912";
chr1	undefined	intron_retention	151157981	151158426	.	-	.	gene_id "intron_retention.15"; transcript_id "intron_retention.15"; gene_name "ENSG00000163159.7"; flanks "151158426-,151157982^"; structure "0,1^2-"; splice_chain ",151158274^151158096-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.405604";
chr1	undefined	intron_retention	153923735	153924738	.	-	.	gene_id "intron_retention.16"; transcript_id "intron_retention.16"; gene_name "ENSG00000160741.12"; flanks "153924738-,153923736^"; structure "0,1^2-"; splice_chain ",153924494^153924142-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.747344";
chr1	undefined	intron_retention	153925046	153925310	.	-	.	gene_id "intron_retention.17"; transcript_id "intron_retention.17"; gene_name "ENSG00000160741.12"; flanks "153925310-,153925047^"; structure "0,1^2-"; splice_chain ",153925281^153925111-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.805308";
chr1	undefined	intron_retention	153925046	153925310	.	-	.	gene_id "intron_retention.18"; transcript_id "intron_retention.18"; gene_name "ENSG00000160741.12"; flanks "153925310-,153925047^"; structure "0,1^2-"; splice_chain ",153925281^153925126-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.914077";
chr1	undefined	intron_retention	158464191	158464676	.	-	.	gene_id "intron_retention.20"; transcript_id "intron_retention.20"; gene_name "ENSG00000236656.1"; flanks "158464676-,158464192^"; structure "0,1^2-"; splice_chain ",158464445^158464344-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.149499";
chr1	undefined	intron_retention	161952981	161953737	.	-	.	gene_id "intron_retention.21"; transcript_id "intron_retention.21"; gene_name "ENSG00000162745.6"; flanks "161953737-,161952982^"; structure "0,1^2-"; splice_chain ",161953386^161953125-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.770439";
chr1	undefined	intron_retention	161952981	161953737	.	-	.	gene_id "intron_retention.22"; transcript_id "intron_retention.22"; gene_name "ENSG00000162745.6"; flanks "161953737-,161952982^"; structure "0,1^2-"; splice_chain ",161953386^161953195-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.854593";
chr10	undefined	intron_retention	60047320	60049346	.	+	.	gene_id "intron_retention.24"; transcript_id "intron_retention.24"; gene_name "ENSG00000122873.7"; flanks "60047321-,60049346^"; structure "0,1^2-"; splice_chain ",60047517^60048036-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.505605";
chr10	undefined	intron_retention	17645558	17645743	.	-	.	gene_id "intron_retention.25"; transcript_id "intron_retention.25"; gene_name "ENSG00000165996.9"; flanks "17645743-,17645559^"; structure "0,1^2-"; splice_chain ",17645725^17645647-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.363824";
chr10	undefined	intron_retention	74092587	74095689	.	-	.	gene_id "intron_retention.28"; transcript_id "intron_retention.28"; gene_name "ENSG00000148719.10"; flanks "74095689-,74092588^"; structure "0,1^2-"; splice_chain ",74095538^74094375-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.580354";
chr10	undefined	intron_retention	74092587	74095689	.	-	.	gene_id "intron_retention.29"; transcript_id "intron_retention.29"; gene_name "ENSG00000148719.10"; flanks "74095689-,74092588^"; structure "0,1^2-"; splice_chain ",74095592^74094375-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.904433";
chr11	undefined	intron_retention	828229	828711	.	+	.	gene_id "intron_retention.32"; transcript_id "intron_retention.32"; gene_name "ENSG00000177685.12"; flanks "828230-,828711^"; structure "0,1^2-"; splice_chain ",828259^828575-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.777196";
chr11	undefined	intron_retention	3427728	3428927	.	+	.	gene_id "intron_retention.33"; transcript_id "intron_retention.33"; gene_name "ENSG00000223756.2"; flanks "3427729-,3428927^"; structure "0,1^2-"; splice_chain ",3427840^3428852-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.861959";
chr11	undefined	intron_retention	3427728	3428927	.	+	.	gene_id "intron_retention.34"; transcript_id "intron_retention.34"; gene_name "ENSG00000223756.2"; flanks "3427729-,3428927^"; structure "0,1^2-"; splice_chain ",3427945^3428852-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.743737";
chr11	undefined	intron_retention	57310113	57310847	.	+	.	gene_id "intron_retention.35"; transcript_id "intron_retention.35"; gene_name "ENSG00000214872.4"; flanks "57310114-,57310847^"; structure "0,1^2-"; splice_chain ",57310653^57310732-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.744262";
chr11	undefined	intron_retention	59855733	59856294	.	+	.	gene_id "intron_retention.36"; transcript_id "intron_retention.36"; gene_name "ENSG00000149534.4"; flanks "59855734-,59856294^"; structure "0,1^2-"; splice_chain ",59856134^59856223-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.575241";
chr11	undefined	intron_retention	115267983	115268376	.	+	.	gene_id "intron_retention.38"; transcript_id "intron_retention.38"; gene_name "ENSG00000256315.1"; flanks "115267984-,115268376^"; structure "0,1^2-"; splice_chain ",115268246^115268301-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.916416";
chr11	undefined	intron_retention	117070036	117070545	.	+	.	gene_id "intron_retention.39"; transcript_id "intron_retention.39"; gene_name "ENSG00000149591.12"; flanks "117070037-,117070545^"; structure "0,1^2-"; splice_chain ",117070148^117070349-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.602284";
chr11	undefined	intron_retention	118401755	118402586	.	+	.	gene_id "intron_retention.40"; transcript_id "intron_retention.40"; gene_name "ENSG00000149582.11"; flanks "118401756-,118402586^"; structure "0,1^2-"; splice_chain ",118401949^118402490-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.266224";
chr11	undefined	intron_retention	118401755	118402586	.	+	.	gene_id "intron_retention.41"; transcript_id "intron_retention.41"; gene_name "ENSG00000149582.11"; flanks "118401756-,118402586^"; structure "0,1^2-"; splice_chain ",118401949^118402493-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.726843";
chr11	undefined	intron_retention	118401755	118402586	.	+	.	gene_id "intron_retention.42"; transcript_id "intron_retention.42"; gene_name "ENSG00000149582.11"; flanks "118401756-,118402586^"; structure "0,1^2-"; splice_chain ",118402241^118402490-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.706984";
chr11	undefined	intron_retention	118401755	118402586	.	+	.	gene_id "intron_retention.43"; transcript_id "intron_retention.43"; gene_name "ENSG00000149582.11"; flanks "118401756-,118402586^"; structure "0,1^2-"; splice_chain ",118402316^118402490-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.791506";
chr11	undefined	intron_retention	118402811	118403176	.	+	.	gene_id "intron_retention.44"; transcript_id "intron_retention.44"; gene_name "ENSG00000149582.11"; flanks "118402812-,118403176^"; structure "0,1^2-"; splice_chain ",118402914^118403050-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.967345";
chr11	undefined	intron_retention	119056557	119057266	.	+	.	gene_id "intron_retention.46"; transcript_id "intron_retention.46"; gene_name "ENSG00000172367.11"; flanks "119056558-,119057266^"; structure "0,1^2-"; splice_chain ",119056874^119057188-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.347177";
chr11	undefined	intron_retention	119056800	119057266	.	+	.	gene_id "intron_retention.47"; transcript_id "intron_retention.47"; gene_name "ENSG00000172367.11"; flanks "119056801-,119057266^"; structure "0,1^2-"; splice_chain ",119056950^119057188-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.867431";
chr11	undefined	intron_retention	124077889	124078819	.	+	.	gene_id "intron_retention.48"; transcript_id "intron_retention.48"; gene_name "ENSG00000239426.3"; flanks "124077890-,124078819^"; structure "0,1^2-"; splice_chain ",124078395^124078522-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.407258";
chr11	undefined	intron_retention	405715	406370	.	-	.	gene_id "intron_retention.49"; transcript_id "intron_retention.49"; gene_name "ENSG00000185187.8"; flanks "406370-,405716^"; structure "0,1^2-"; splice_chain ",406142^406059-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.855282";
chr11	undefined	intron_retention	405715	406538	.	-	.	gene_id "intron_retention.50"; transcript_id "intron_retention.50"; gene_name "ENSG00000185187.8"; flanks "406538-,405716^"; structure "0,1^2-"; splice_chain ",406349^406059-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.480874";
chr11	undefined	intron_retention	555304	555930	.	-	.	gene_id "intron_retention.51"; transcript_id "intron_retention.51"; gene_name "ENSG00000185522.4"; flanks "555930-,555305^"; structure "0,1^2-"; splice_chain ",555734^555503-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.398742";
chr11	undefined	intron_retention	1775032	1775368	.	-	.	gene_id "intron_retention.52"; transcript_id "intron_retention.52"; gene_name "ENSG00000117984.8"; flanks "1775368-,1775033^"; structure "0,1^2-"; splice_chain ",1775224^1775131-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.568776";
chr11	undefined	intron_retention	2905899	2906979	.	-	.	gene_id "intron_retention.53"; transcript_id "intron_retention.53"; gene_name "ENSG00000129757.8"; flanks "2906979-,2905900^"; structure "0,1^2-"; splice_chain ",2906864^2906696-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.748694";
chr11	undefined	intron_retention	5686398	5686912	.	-	.	gene_id "intron_retention.54"; transcript_id "intron_retention.54"; gene_name "ENSG00000132256.14"; flanks "5686912-,5686399^"; structure "0,1^2-"; splice_chain ",5686886^5686625-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.335725";
chr11	undefined	intron_retention	6632618	6633179	.	-	.	gene_id "intron_retention.56"; transcript_id "intron_retention.56"; gene_name "ENSG00000166337.5"; flanks "6633179-,6632619^"; structure "0,1^2-"; splice_chain ",6632895^6632683-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.848689";
chr11	undefined	intron_retention	6638205	6638659	.	-	.	gene_id "intron_retention.57"; transcript_id "intron_retention.57"; gene_name "ENSG00000166340.10"; flanks "6638659-,6638206^"; structure "0,1^2-"; splice_chain ",6638532^6638384-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.747314";
chr11	undefined	intron_retention	10821098	10821715	.	-	.	gene_id "intron_retention.59"; transcript_id "intron_retention.59"; gene_name "ENSG00000110321.11"; flanks "10821715-,10821099^"; structure "0,1^2-"; splice_chain ",10821637^10821156-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.866170";
chr11	undefined	intron_retention	10821098	10821715	.	-	.	gene_id "intron_retention.60"; transcript_id "intron_retention.60"; gene_name "ENSG00000110321.11"; flanks "10821715-,10821099^"; structure "0,1^2-"; splice_chain ",10821637^10821303-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.549965";
chr11	undefined	intron_retention	10821098	10821895	.	-	.	gene_id "intron_retention.61"; transcript_id "intron_retention.61"; gene_name "ENSG00000110321.11"; flanks "10821895-,10821099^"; structure "0,1^2-"; splice_chain ",10821791^10821303-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.508797";
chr11	undefined	intron_retention	10821636	10821895	.	-	.	gene_id "intron_retention.62"; transcript_id "intron_retention.62"; gene_name "ENSG00000110321.11"; flanks "10821895-,10821637^"; structure "0,1^2-"; splice_chain ",10821791^10821715-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.870058";
chr11	undefined	intron_retention	10825445	10825750	.	-	.	gene_id "intron_retention.63"; transcript_id "intron_retention.63"; gene_name "ENSG00000110321.11"; flanks "10825750-,10825446^"; structure "0,1^2-"; splice_chain ",10825684^10825597-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.358167";
chr11	undefined	intron_retention	62363750	62364004	.	-	.	gene_id "intron_retention.64"; transcript_id "intron_retention.64"; gene_name "ENSG00000149480.2"; flanks "62364004-,62363751^"; structure "0,1^2-"; splice_chain ",62363930^62363809-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.202764";
chr11	undefined	intron_retention	62365798	62366111	.	-	.	gene_id "intron_retention.65"; transcript_id "intron_retention.65"; gene_name "ENSG00000149480.2"; flanks "62366111-,62365799^"; structure "0,1^2-"; splice_chain ",62365994^62365862-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.417596";
chr11	undefined	intron_retention	118918959	118919275	.	-	.	gene_id "intron_retention.66"; transcript_id "intron_retention.66"; gene_name "ENSG00000149428.14"; flanks "118919275-,118918960^"; structure "0,1^2-"; splice_chain ",118919188^118919082-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.454053";
chr11	undefined	intron_retention	118926204	118926555	.	-	.	gene_id "intron_retention.67"; transcript_id "intron_retention.67"; gene_name "ENSG00000149428.14"; flanks "118926555-,118926205^"; structure "0,1^2-"; splice_chain ",118926462^118926283-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.321481";
chr12	undefined	intron_retention	50357274	50357958	.	+	.	gene_id "intron_retention.70"; transcript_id "intron_retention.70"; gene_name "ENSG00000161798.6"; flanks "50357275-,50357958^"; structure "0,1^2-"; splice_chain ",50357439^50357875-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.824824";
chr12	undefined	intron_retention	58013309	58014235	.	+	.	gene_id "intron_retention.71"; transcript_id "intron_retention.71"; gene_name "ENSG00000135502.12"; flanks "58013310-,58014235^"; structure "0,1^2-"; splice_chain ",58013661^58014125-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.675534";
chr12	undefined	intron_retention	58016341	58016717	.	+	.	gene_id "intron_retention.72"; transcript_id "intron_retention.72"; gene_name "ENSG00000135502.12"; flanks "58016342-,58016717^"; structure "0,1^2-"; splice_chain ",58016424^58016570-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.499642";
chr12	undefined	intron_retention	69233053	69237612	.	+	.	gene_id "intron_retention.73"; transcript_id "intron_retention.73"; gene_name "ENSG00000135679.17"; flanks "69233054-,69237612^"; structure "0,1^2-"; splice_chain ",69236304^69237544-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.729800";
chr12	undefined	intron_retention	69233053	69237612	.	+	.	gene_id "intron_retention.74"; transcript_id "intron_retention.74"; gene_name "ENSG00000135679.17"; flanks "69233054-,69237612^"; structure "0,1^2-"; splice_chain ",69237044^69237521-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.830298";
chr12	undefined	intron_retention	69233053	69239214	.	+	.	gene_id "intron_retention.75"; transcript_id "intron_retention.75"; gene_name "ENSG00000135679.17"; flanks "69233054-,69239214^"; structure "0,1^2-"; splice_chain ",69237612^69237714-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.741839";
chr12	undefined	intron_retention	7086528	7087669	.	-	.	gene_id "intron_retention.80"; transcript_id "intron_retention.80"; gene_name "ENSG00000111684.6"; flanks "7087669-,7086529^"; structure "0,1^2-"; splice_chain ",7087583^7086687-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.887392";
chr12	undefined	intron_retention	52979372	52979956	.	-	.	gene_id "intron_retention.83"; transcript_id "intron_retention.83"; gene_name "ENSG00000170486.6"; flanks "52979956-,52979373^"; structure "0,1^2-"; splice_chain ",52979747^52979619-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.918286";
chr12	undefined	intron_retention	53458387	53459750	.	-	.	gene_id "intron_retention.84"; transcript_id "intron_retention.84"; gene_name "ENSG00000167778.4"; flanks "53459750-,53458388^"; structure "0,1^2-"; splice_chain ",53459486^53459058-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.912395";
chr12	undefined	intron_retention	54756228	54758258	.	-	.	gene_id "intron_retention.85"; transcript_id "intron_retention.85"; gene_name "ENSG00000139572.3"; flanks "54758258-,54756229^"; structure "0,1^2-"; splice_chain ",54758177^54757643-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.473040";
chr12	undefined	intron_retention	56558086	56558515	.	-	.	gene_id "intron_retention.86"; transcript_id "intron_retention.86"; gene_name "ENSG00000139613.7"; flanks "56558515-,56558087^"; structure "0,1^2-"; splice_chain ",56558432^56558152-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.751159";
chr12	undefined	intron_retention	56574760	56575381	.	-	.	gene_id "intron_retention.87"; transcript_id "intron_retention.87"; gene_name "ENSG00000139613.7"; flanks "56575381-,56574761^"; structure "0,1^2-"; splice_chain ",56575266^56574885-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.897259";
chr12	undefined	intron_retention	77254063	77256739	.	-	.	gene_id "intron_retention.88"; transcript_id "intron_retention.88"; gene_name "ENSG00000175183.5"; flanks "77256739-,77254064^"; structure "0,1^2-"; splice_chain ",77256590^77254193-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.602433";
chr12	undefined	intron_retention	77254063	77257124	.	-	.	gene_id "intron_retention.89"; transcript_id "intron_retention.89"; gene_name "ENSG00000175183.5"; flanks "77257124-,77254064^"; structure "0,1^2-"; splice_chain ",77256956^77254193-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.380341";
chr12	undefined	intron_retention	77254063	77257124	.	-	.	gene_id "intron_retention.90"; transcript_id "intron_retention.90"; gene_name "ENSG00000175183.5"; flanks "77257124-,77254064^"; structure "0,1^2-"; splice_chain ",77256956^77256739-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.438288";
chr12	undefined	intron_retention	120220321	120221855	.	-	.	gene_id "intron_retention.92"; transcript_id "intron_retention.92"; gene_name "ENSG00000122966.9"; flanks "120221855-,120220322^"; structure "0,1^2-"; splice_chain ",120221712^120220441-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.918871";
chr13	undefined	intron_retention	21141808	21142136	.	+	.	gene_id "intron_retention.93"; transcript_id "intron_retention.93"; gene_name "ENSG00000032742.13"; flanks "21141809-,21142136^"; structure "0,1^2-"; splice_chain ",21141924^21142024-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.952477";
chr14	undefined	intron_retention	24563261	24564054	.	+	.	gene_id "intron_retention.95"; transcript_id "intron_retention.95"; gene_name "ENSG00000100889.7"; flanks "24563262-,24564054^"; structure "0,1^2-"; splice_chain ",24563463^24563975-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.934127";
chr14	undefined	intron_retention	50246312	50246524	.	+	.	gene_id "intron_retention.97"; transcript_id "intron_retention.97"; gene_name "ENSG00000165516.6"; flanks "50246313-,50246524^"; structure "0,1^2-"; splice_chain ",50246393^50246466-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.846188";
chr14	undefined	intron_retention	61518723	61519703	.	+	.	gene_id "intron_retention.98"; transcript_id "intron_retention.98"; gene_name "ENSG00000139974.11"; flanks "61518724-,61519703^"; structure "0,1^2-"; splice_chain ",61518853^61519067-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.302881";
chr14	undefined	intron_retention	24683515	24683805	.	-	.	gene_id "intron_retention.100"; transcript_id "intron_retention.100"; gene_name "ENSG00000260669.2"; flanks "24683805-,24683516^"; structure "0,1^2-"; splice_chain ",24683698^24683601-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.496252";
chr15	undefined	intron_retention	40568127	40569687	.	+	.	gene_id "intron_retention.106"; transcript_id "intron_retention.106"; gene_name "ENSG00000137843.7"; flanks "40568128-,40569687^"; structure "0,1^2-"; splice_chain ",40568306^40569317-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.700700";
chr15	undefined	intron_retention	64444441	64444941	.	+	.	gene_id "intron_retention.108"; transcript_id "intron_retention.108"; gene_name "ENSG00000157734.9"; flanks "64444442-,64444941^"; structure "0,1^2-"; splice_chain ",64444525^64444837-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.784094";
chr15	undefined	intron_retention	64445443	64445883	.	+	.	gene_id "intron_retention.109"; transcript_id "intron_retention.109"; gene_name "ENSG00000157734.9"; flanks "64445444-,64445883^"; structure "0,1^2-"; splice_chain ",64445538^64445851-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.267862";
chr15	undefined	intron_retention	64445443	64445883	.	+	.	gene_id "intron_retention.110"; transcript_id "intron_retention.110"; gene_name "ENSG00000157734.9"; flanks "64445444-,64445883^"; structure "0,1^2-"; splice_chain ",64445585^64445851-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.647476";
chr15	undefined	intron_retention	64445443	64446201	.	+	.	gene_id "intron_retention.112"; transcript_id "intron_retention.112"; gene_name "ENSG00000157734.9"; flanks "64445444-,64446201^"; structure "0,1^2-"; splice_chain ",64445883^64446134-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.187906";
chr15	undefined	intron_retention	64445443	64447102	.	+	.	gene_id "intron_retention.113"; transcript_id "intron_retention.113"; gene_name "ENSG00000157734.9"; flanks "64445444-,64447102^"; structure "0,1^2-"; splice_chain ",64446201^64446586-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.566920";
chr15	undefined	intron_retention	74753605	74754372	.	+	.	gene_id "intron_retention.114"; transcript_id "intron_retention.114"; gene_name "ENSG00000247240.3"; flanks "74753606-,74754372^"; structure "0,1^2-"; splice_chain ",74753759^74754224-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.669621";
chr15	undefined	intron_retention	78080230	78080917	.	+	.	gene_id "intron_retention.115"; transcript_id "intron_retention.115"; gene_name "ENSG00000259213.1"; flanks "78080231-,78080917^"; structure "0,1^2-"; splice_chain ",78080487^78080723-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.242165";
chr15	undefined	intron_retention	89878283	89879392	.	+	.	gene_id "intron_retention.116"; transcript_id "intron_retention.116"; gene_name "ENSG00000261441.1"; flanks "89878284-,89879392^"; structure "0,1^2-"; splice_chain ",89878600^89878880-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.346973";
chr15	undefined	intron_retention	44876011	44876756	.	-	.	gene_id "intron_retention.117"; transcript_id "intron_retention.117"; gene_name "ENSG00000104133.10"; flanks "44876756-,44876012^"; structure "0,1^2-"; splice_chain ",44876363^44876133-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.847345";
chr15	undefined	intron_retention	44890462	44891034	.	-	.	gene_id "intron_retention.118"; transcript_id "intron_retention.118"; gene_name "ENSG00000104133.10"; flanks "44891034-,44890463^"; structure "0,1^2-"; splice_chain ",44890829^44890571-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.402987";
chr15	undefined	intron_retention	84873177	84873443	.	-	.	gene_id "intron_retention.119"; transcript_id "intron_retention.119"; gene_name "ENSG00000225151.6"; flanks "84873443-,84873178^"; structure "0,1^2-"; splice_chain ",84873348^84873268-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.841082";
chr15	undefined	intron_retention	84873177	84873443	.	-	.	gene_id "intron_retention.120"; transcript_id "intron_retention.120"; gene_name "ENSG00000225151.6"; flanks "84873443-,84873178^"; structure "0,1^2-"; splice_chain ",84873352^84873268-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.651787";
chr16	undefined	intron_retention	105776	106420	.	+	.	gene_id "intron_retention.121"; transcript_id "intron_retention.121"; gene_name "ENSG00000161981.6"; flanks "105777-,106420^"; structure "0,1^2-"; splice_chain ",105882^106321-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.535376";
chr16	undefined	intron_retention	105776	106613	.	+	.	gene_id "intron_retention.122"; transcript_id "intron_retention.122"; gene_name "ENSG00000161981.6"; flanks "105777-,106613^"; structure "0,1^2-"; splice_chain ",105882^106539-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.290014";
chr16	undefined	intron_retention	105776	106613	.	+	.	gene_id "intron_retention.123"; transcript_id "intron_retention.123"; gene_name "ENSG00000161981.6"; flanks "105777-,106613^"; structure "0,1^2-"; splice_chain ",106420^106539-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.632797";
chr16	undefined	intron_retention	2202820	2203071	.	+	.	gene_id "intron_retention.124"; transcript_id "intron_retention.124"; gene_name "ENSG00000167964.8"; flanks "2202821-,2203071^"; structure "0,1^2-"; splice_chain ",2202886^2202990-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.273990";
chr16	undefined	intron_retention	3115297	3115688	.	+	.	gene_id "intron_retention.125"; transcript_id "intron_retention.125"; gene_name "ENSG00000008517.12"; flanks "3115298-,3115688^"; structure "0,1^2-"; splice_chain ",3115495^3115622-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.941326";
chr16	undefined	intron_retention	3115297	3115656	.	+	.	gene_id "intron_retention.126"; transcript_id "intron_retention.126"; gene_name "ENSG00000008517.12"; flanks "3115298-,3115656^"; structure "0,1^2-"; splice_chain ",3115495^3115643-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.849366";
chr16	undefined	intron_retention	3115297	3115827	.	+	.	gene_id "intron_retention.127"; transcript_id "intron_retention.127"; gene_name "ENSG00000008517.12"; flanks "3115298-,3115827^"; structure "0,1^2-"; splice_chain ",3115495^3115782-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.759303";
chr16	undefined	intron_retention	3115297	3115827	.	+	.	gene_id "intron_retention.128"; transcript_id "intron_retention.128"; gene_name "ENSG00000008517.12"; flanks "3115298-,3115827^"; structure "0,1^2-"; splice_chain ",3115495^3115785-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.598608";
chr16	undefined	intron_retention	3115642	3115827	.	+	.	gene_id "intron_retention.129"; transcript_id "intron_retention.129"; gene_name "ENSG00000008517.12"; flanks "3115643-,3115827^"; structure "0,1^2-"; splice_chain ",3115656^3115785-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.702844";
chr16	undefined	intron_retention	3115297	3115827	.	+	.	gene_id "intron_retention.130"; transcript_id "intron_retention.130"; gene_name "ENSG00000008517.12"; flanks "3115298-,3115827^"; structure "0,1^2-"; splice_chain ",3115688^3115782-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.910337";
chr16	undefined	intron_retention	3115297	3115827	.	+	.	gene_id "intron_retention.131"; transcript_id "intron_retention.131"; gene_name "ENSG00000008517.12"; flanks "3115298-,3115827^"; structure "0,1^2-"; splice_chain ",3115688^3115785-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.443437";
chr16	undefined	intron_retention	3115297	3115827	.	+	.	gene_id "intron_retention.132"; transcript_id "intron_retention.132"; gene_name "ENSG00000008517.12"; flanks "3115298-,3115827^"; structure "0,1^2-"; splice_chain ",3115711^3115782-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.851304";
chr16	undefined	intron_retention	3115297	3115827	.	+	.	gene_id "intron_retention.133"; transcript_id "intron_retention.133"; gene_name "ENSG00000008517.12"; flanks "3115298-,3115827^"; structure "0,1^2-"; splice_chain ",3115711^3115785-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.492758";
chr16	undefined	intron_retention	3117377	3117614	.	+	.	gene_id "intron_retention.134"; transcript_id "intron_retention.134"; gene_name "ENSG00000008517.12"; flanks "3117378-,3117614^"; structure "0,1^2-"; splice_chain ",3117416^3117555-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.312417";
chr16	undefined	intron_retention	3118990	3119668	.	+	.	gene_id "intron_retention.135"; transcript_id "intron_retention.135"; gene_name "ENSG00000008517.12"; flanks "3118991-,3119668^"; structure "0,1^2-"; splice_chain ",3119110^3119282-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.819622";
chr16	undefined	intron_retention	70399835	70400764	.	+	.	gene_id "intron_retention.136"; transcript_id "intron_retention.136"; gene_name "ENSG00000168872.11"; flanks "70399836-,70400764^"; structure "0,1^2-"; splice_chain ",70400165^70400527-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.629411";
chr16	undefined	intron_retention	89799709	89799965	.	+	.	gene_id "intron_retention.137"; transcript_id "intron_retention.137"; gene_name "ENSG00000158805.7"; flanks "89799710-,89799965^"; structure "0,1^2-"; splice_chain ",89799820^89799890-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.321124";
chr16	undefined	intron_retention	4404542	4405373	.	-	.	gene_id "intron_retention.138"; transcript_id "intron_retention.138"; gene_name "ENSG00000262246.1"; flanks "4405373-,4404543^"; structure "0,1^2-"; splice_chain ",4405287^4405164-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.189579";
chr16	undefined	intron_retention	4411749	4412161	.	-	.	gene_id "intron_retention.139"; transcript_id "intron_retention.139"; gene_name "ENSG00000262246.1"; flanks "4412161-,4411750^"; structure "0,1^2-"; splice_chain ",4411986^4411804-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.845252";
chr16	undefined	intron_retention	15153878	15155762	.	-	.	gene_id "intron_retention.140"; transcript_id "intron_retention.140"; gene_name "ENSG00000085721.8"; flanks "15155762-,15153879^"; structure "0,1^2-"; splice_chain ",15155646^15154030-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.276015";
chr16	undefined	intron_retention	23474862	23479021	.	-	.	gene_id "intron_retention.141"; transcript_id "intron_retention.141"; gene_name "ENSG00000103365.11"; flanks "23479021-,23474863^"; structure "0,1^2-"; splice_chain ",23478753^23478099-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.646795";
chr16	undefined	intron_retention	23474862	23479021	.	-	.	gene_id "intron_retention.142"; transcript_id "intron_retention.142"; gene_name "ENSG00000103365.11"; flanks "23479021-,23474863^"; structure "0,1^2-"; splice_chain ",23478310^23478151-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.479788";
chr16	undefined	intron_retention	23504680	23505699	.	-	.	gene_id "intron_retention.143"; transcript_id "intron_retention.143"; gene_name "ENSG00000103365.11"; flanks "23505699-,23504681^"; structure "0,1^2-"; splice_chain ",23505620^23504779-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.925644";
chr16	undefined	intron_retention	23504680	23505699	.	-	.	gene_id "intron_retention.144"; transcript_id "intron_retention.144"; gene_name "ENSG00000103365.11"; flanks "23505699-,23504681^"; structure "0,1^2-"; splice_chain ",23505624^23504779-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.793535";
chr16	undefined	intron_retention	23504680	23505699	.	-	.	gene_id "intron_retention.145"; transcript_id "intron_retention.145"; gene_name "ENSG00000103365.11"; flanks "23505699-,23504681^"; structure "0,1^2-"; splice_chain ",23505624^23504842-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.685522";
chr16	undefined	intron_retention	23504680	23505699	.	-	.	gene_id "intron_retention.146"; transcript_id "intron_retention.146"; gene_name "ENSG00000103365.11"; flanks "23505699-,23504681^"; structure "0,1^2-"; splice_chain ",23505624^23504908-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.477086";
chr16	undefined	intron_retention	30004779	30005129	.	-	.	gene_id "intron_retention.147"; transcript_id "intron_retention.147"; gene_name "ENSG00000149929.11"; flanks "30005129-,30004780^"; structure "0,1^2-"; splice_chain ",30004961^30004878-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.499192";
chr16	undefined	intron_retention	30006423	30006784	.	-	.	gene_id "intron_retention.148"; transcript_id "intron_retention.148"; gene_name "ENSG00000149929.11"; flanks "30006784-,30006424^"; structure "0,1^2-"; splice_chain ",30006664^30006538-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.464610";
chr16	undefined	intron_retention	67218588	67218960	.	-	.	gene_id "intron_retention.150"; transcript_id "intron_retention.150"; gene_name "ENSG00000179044.11"; flanks "67218960-,67218589^"; structure "0,1^2-"; splice_chain ",67218805^67218713-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.811051";
chr16	undefined	intron_retention	67969322	67969600	.	-	.	gene_id "intron_retention.151"; transcript_id "intron_retention.151"; gene_name "ENSG00000205220.7"; flanks "67969600-,67969323^"; structure "0,1^2-"; splice_chain ",67969485^67969381-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.259393";
chr16	undefined	intron_retention	67969865	67970215	.	-	.	gene_id "intron_retention.152"; transcript_id "intron_retention.152"; gene_name "ENSG00000205220.7"; flanks "67970215-,67969866^"; structure "0,1^2-"; splice_chain ",67970118^67970006-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.511665";
chr16	undefined	intron_retention	67970300	67970990	.	-	.	gene_id "intron_retention.153"; transcript_id "intron_retention.153"; gene_name "ENSG00000205220.7"; flanks "67970990-,67970301^"; structure "0,1^2-"; splice_chain ",67970597^67970388-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.590583";
chr16	undefined	intron_retention	70253476	70253894	.	-	.	gene_id "intron_retention.154"; transcript_id "intron_retention.154"; gene_name "ENSG00000261556.4"; flanks "70253894-,70253477^"; structure "0,1^2-"; splice_chain ",70253815^70253698-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.755145";
chr16	undefined	intron_retention	75589701	75590184	.	-	.	gene_id "intron_retention.155"; transcript_id "intron_retention.155"; gene_name "ENSG00000205084.6"; flanks "75590184-,75589702^"; structure "0,1^2-"; splice_chain ",75589969^75589871-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.313927";
chr17	undefined	intron_retention	1943511	1943899	.	+	.	gene_id "intron_retention.156"; transcript_id "intron_retention.156"; gene_name "ENSG00000108963.13"; flanks "1943512-,1943899^"; structure "0,1^2-"; splice_chain ",1943668^1943799-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.557873";
chr17	undefined	intron_retention	1944774	1945169	.	+	.	gene_id "intron_retention.157"; transcript_id "intron_retention.157"; gene_name "ENSG00000108963.13"; flanks "1944775-,1945169^"; structure "0,1^2-"; splice_chain ",1944915^1945062-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.374664";
chr17	undefined	intron_retention	6353023	6353392	.	+	.	gene_id "intron_retention.158"; transcript_id "intron_retention.158"; gene_name "ENSG00000129195.11"; flanks "6353024-,6353392^"; structure "0,1^2-"; splice_chain ",6353098^6353348-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.779766";
chr17	undefined	intron_retention	26554331	26555091	.	+	.	gene_id "intron_retention.159"; transcript_id "intron_retention.159"; gene_name "ENSG00000237575.4"; flanks "26554332-,26555091^"; structure "0,1^2-"; splice_chain ",26554519^26554634-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.829653";
chr17	undefined	intron_retention	37821968	37822808	.	+	.	gene_id "intron_retention.160"; transcript_id "intron_retention.160"; gene_name "ENSG00000173991.5"; flanks "37821969-,37822808^"; structure "0,1^2-"; splice_chain ",37822032^37822105-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.388597";
chr17	undefined	intron_retention	61904979	61905569	.	+	.	gene_id "intron_retention.161"; transcript_id "intron_retention.161"; gene_name "ENSG00000087191.8"; flanks "61904980-,61905569^"; structure "0,1^2-"; splice_chain ",61905283^61905479-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.760857";
chr17	undefined	intron_retention	61904979	61905569	.	+	.	gene_id "intron_retention.162"; transcript_id "intron_retention.162"; gene_name "ENSG00000087191.8"; flanks "61904980-,61905569^"; structure "0,1^2-"; splice_chain ",61905283^61905498-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.403734";
chr17	undefined	intron_retention	647653	651272	.	-	.	gene_id "intron_retention.164"; transcript_id "intron_retention.164"; gene_name "ENSG00000179409.6"; flanks "651272-,647654^"; structure "0,1^2-"; splice_chain ",650785^650522-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.969438";
chr17	undefined	intron_retention	5487006	5487829	.	-	.	gene_id "intron_retention.165"; transcript_id "intron_retention.165"; gene_name "ENSG00000091592.11"; flanks "5487829-,5487007^"; structure "0,1^2-"; splice_chain ",5487613^5487423-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.790278";
chr17	undefined	intron_retention	8647844	8648154	.	-	.	gene_id "intron_retention.166"; transcript_id "intron_retention.166"; gene_name "ENSG00000161973.6"; flanks "8648154-,8647845^"; structure "0,1^2-"; splice_chain ",8648147^8648038-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.452888";
chr17	undefined	intron_retention	15531273	15532512	.	-	.	gene_id "intron_retention.167"; transcript_id "intron_retention.167"; gene_name "ENSG00000221926.7"; flanks "15532512-,15531274^"; structure "0,1^2-"; splice_chain ",15532188^15531375-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.893695";
chr17	undefined	intron_retention	20278681	20279706	.	-	.	gene_id "intron_retention.168"; transcript_id "intron_retention.168"; gene_name "ENSG00000214832.4"; flanks "20279706-,20278682^"; structure "0,1^2-"; splice_chain ",20279444^20279148-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.269997";
chr17	undefined	intron_retention	56080720	56082961	.	-	.	gene_id "intron_retention.172"; transcript_id "intron_retention.172"; gene_name "ENSG00000136450.8"; flanks "56082961-,56080721^"; structure "0,1^2-"; splice_chain ",56082759^56082402-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.927515";
chr17	undefined	intron_retention	56080720	56082961	.	-	.	gene_id "intron_retention.173"; transcript_id "intron_retention.173"; gene_name "ENSG00000136450.8"; flanks "56082961-,56080721^"; structure "0,1^2-"; splice_chain ",56082775^56082402-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.982770";
chr17	undefined	intron_retention	76987798	76990002	.	-	.	gene_id "intron_retention.175"; transcript_id "intron_retention.175"; gene_name "ENSG00000171302.12"; flanks "76990002-,76987799^"; structure "0,1^2-"; splice_chain ",76988492^76988222-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.933178";
chr17	undefined	intron_retention	76993073	76993726	.	-	.	gene_id "intron_retention.176"; transcript_id "intron_retention.176"; gene_name "ENSG00000171302.12"; flanks "76993726-,76993074^"; structure "0,1^2-"; splice_chain ",76993573^76993411-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.882676";
chr17	undefined	intron_retention	79225292	79226483	.	-	.	gene_id "intron_retention.177"; transcript_id "intron_retention.177"; gene_name "ENSG00000157637.8"; flanks "79226483-,79225293^"; structure "0,1^2-"; splice_chain ",79225995^79225412-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.419320";
chr17	undefined	intron_retention	79476996	79477859	.	-	.	gene_id "intron_retention.178"; transcript_id "intron_retention.178"; gene_name "ENSG00000184009.5"; flanks "79477859-,79476997^"; structure "0,1^2-"; splice_chain ",79477505^79477355-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.945820";
chr17	undefined	intron_retention	79477952	79478652	.	-	.	gene_id "intron_retention.179"; transcript_id "intron_retention.179"; gene_name "ENSG00000184009.5"; flanks "79478652-,79477953^"; structure "0,1^2-"; splice_chain ",79478214^79478134-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.341635";
chr17	undefined	intron_retention	79890259	79891252	.	-	.	gene_id "intron_retention.180"; transcript_id "intron_retention.180"; gene_name "ENSG00000183010.12"; flanks "79891252-,79890260^"; structure "0,1^2-"; splice_chain ",79891183^79890839-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.956922";
chr17	undefined	intron_retention	79994259	79994519	.	-	.	gene_id "intron_retention.181"; transcript_id "intron_retention.181"; gene_name "ENSG00000169738.3"; flanks "79994519-,79994260^"; structure "0,1^2-"; splice_chain ",79994420^79994324-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.316190";
chr18	undefined	intron_retention	61826096	61826528	.	+	.	gene_id "intron_retention.182"; transcript_id "intron_retention.182"; gene_name "ENSG00000236392.2"; flanks "61826097-,61826528^"; structure "0,1^2-"; splice_chain ",61826222^61826330-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.454082";
chr18	undefined	intron_retention	14968999	14969756	.	-	.	gene_id "intron_retention.183"; transcript_id "intron_retention.183"; gene_name "ENSG00000264301.1"; flanks "14969756-,14969000^"; structure "0,1^2-"; splice_chain ",14969675^14969571-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.272574";
chr19	undefined	intron_retention	10394156	10394462	.	+	.	gene_id "intron_retention.184"; transcript_id "intron_retention.184"; gene_name "ENSG00000090339.4"; flanks "10394157-,10394462^"; structure "0,1^2-"; splice_chain ",10394170^10394234-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.838504";
chr19	undefined	intron_retention	11470146	11470632	.	+	.	gene_id "intron_retention.185"; transcript_id "intron_retention.185"; gene_name "ENSG00000105520.6"; flanks "11470147-,11470632^"; structure "0,1^2-"; splice_chain ",11470396^11470497-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.434067";
chr19	undefined	intron_retention	11474388	11474888	.	+	.	gene_id "intron_retention.186"; transcript_id "intron_retention.186"; gene_name "ENSG00000105520.6"; flanks "11474389-,11474888^"; structure "0,1^2-"; splice_chain ",11474495^11474837-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.364173";
chr19	undefined	intron_retention	11474388	11474888	.	+	.	gene_id "intron_retention.187"; transcript_id "intron_retention.187"; gene_name "ENSG00000105520.6"; flanks "11474389-,11474888^"; structure "0,1^2-"; splice_chain ",11474511^11474837-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.738593";
chr19	undefined	intron_retention	12917393	12917893	.	+	.	gene_id "intron_retention.188"; transcript_id "intron_retention.188"; gene_name "ENSG00000104889.4"; flanks "12917394-,12917893^"; structure "0,1^2-"; splice_chain ",12917614^12917822-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.429389";
chr19	undefined	intron_retention	12918019	12918320	.	+	.	gene_id "intron_retention.189"; transcript_id "intron_retention.189"; gene_name "ENSG00000104889.4"; flanks "12918020-,12918320^"; structure "0,1^2-"; splice_chain ",12918143^12918233-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.259664";
chr19	undefined	intron_retention	17449762	17450075	.	+	.	gene_id "intron_retention.190"; transcript_id "intron_retention.190"; gene_name "ENSG00000130299.12"; flanks "17449763-,17450075^"; structure "0,1^2-"; splice_chain ",17449835^17449932-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.515439";
chr19	undefined	intron_retention	17597371	17598144	.	+	.	gene_id "intron_retention.191"; transcript_id "intron_retention.191"; gene_name "ENSG00000130304.12"; flanks "17597372-,17598144^"; structure "0,1^2-"; splice_chain ",17597766^17597909-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.960946";
chr19	undefined	intron_retention	17597371	17598144	.	+	.	gene_id "intron_retention.192"; transcript_id "intron_retention.192"; gene_name "ENSG00000130304.12"; flanks "17597372-,17598144^"; structure "0,1^2-"; splice_chain ",17597766^17597983-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.874690";
chr19	undefined	intron_retention	45261502	45262098	.	+	.	gene_id "intron_retention.193"; transcript_id "intron_retention.193"; gene_name "ENSG00000069399.8"; flanks "45261503-,45262098^"; structure "0,1^2-"; splice_chain ",45261670^45261981-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.306013";
chr19	undefined	intron_retention	45261502	45262098	.	+	.	gene_id "intron_retention.194"; transcript_id "intron_retention.194"; gene_name "ENSG00000069399.8"; flanks "45261503-,45262098^"; structure "0,1^2-"; splice_chain ",45261730^45261981-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.877494";
chr19	undefined	intron_retention	50303224	50303407	.	+	.	gene_id "intron_retention.195"; transcript_id "intron_retention.195"; gene_name "ENSG00000196961.8"; flanks "50303225-,50303407^"; structure "0,1^2-"; splice_chain ",50303274^50303354-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.938201";
chr19	undefined	intron_retention	50308709	50309034	.	+	.	gene_id "intron_retention.196"; transcript_id "intron_retention.196"; gene_name "ENSG00000196961.8"; flanks "50308710-,50309034^"; structure "0,1^2-"; splice_chain ",50308833^50308918-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.240370";
chr19	undefined	intron_retention	50308709	50309034	.	+	.	gene_id "intron_retention.197"; transcript_id "intron_retention.197"; gene_name "ENSG00000196961.8"; flanks "50308710-,50309034^"; structure "0,1^2-"; splice_chain ",50308833^50308982-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.940994";
chr19	undefined	intron_retention	50308709	50309198	.	+	.	gene_id "intron_retention.198"; transcript_id "intron_retention.198"; gene_name "ENSG00000196961.8"; flanks "50308710-,50309198^"; structure "0,1^2-"; splice_chain ",50309034^50309129-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.222761";
chr19	undefined	intron_retention	50308709	50309510	.	+	.	gene_id "intron_retention.199"; transcript_id "intron_retention.199"; gene_name "ENSG00000196961.8"; flanks "50308710-,50309510^"; structure "0,1^2-"; splice_chain ",50309198^50309376-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.588644";
chr19	undefined	intron_retention	50308709	50310369	.	+	.	gene_id "intron_retention.200"; transcript_id "intron_retention.200"; gene_name "ENSG00000196961.8"; flanks "50308710-,50310369^"; structure "0,1^2-"; splice_chain ",50309510^50309938-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.550406";
chr19	undefined	intron_retention	54657233	54659419	.	+	.	gene_id "intron_retention.201"; transcript_id "intron_retention.201"; gene_name "ENSG00000088038.13"; flanks "54657234-,54659419^"; structure "0,1^2-"; splice_chain ",54657577^54657681-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.910263";
chr19	undefined	intron_retention	54657233	54659419	.	+	.	gene_id "intron_retention.202"; transcript_id "intron_retention.202"; gene_name "ENSG00000088038.13"; flanks "54657234-,54659419^"; structure "0,1^2-"; splice_chain ",54657577^54658996-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.951914";
chr19	undefined	intron_retention	54657233	54659419	.	+	.	gene_id "intron_retention.203"; transcript_id "intron_retention.203"; gene_name "ENSG00000088038.13"; flanks "54657234-,54659419^"; structure "0,1^2-"; splice_chain ",54657577^54659047-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.746375";
chr19	undefined	intron_retention	58965594	58969200	.	+	.	gene_id "intron_retention.204"; transcript_id "intron_retention.204"; gene_name "ENSG00000249471.3"; flanks "58965595-,58969200^"; structure "0,1^2-"; splice_chain ",58965711^58966550-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.471618";
chr19	undefined	intron_retention	6007700	6008235	.	-	.	gene_id "intron_retention.205"; transcript_id "intron_retention.205"; gene_name "ENSG00000087903.8"; flanks "6008235-,6007701^"; structure "0,1^2-"; splice_chain ",6008117^6007813-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.393019";
chr19	undefined	intron_retention	6210389	6212492	.	-	.	gene_id "intron_retention.206"; transcript_id "intron_retention.206"; gene_name "ENSG00000267427.1"; flanks "6212492-,6210390^"; structure "0,1^2-"; splice_chain ",6211309^6211076-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.955281";
chr19	undefined	intron_retention	6375158	6379069	.	-	.	gene_id "intron_retention.207"; transcript_id "intron_retention.207"; gene_name "ENSG00000125650.4"; flanks "6379069-,6375159^"; structure "0,1^2-"; splice_chain ",6375713^6375627-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.366722";
chr19	undefined	intron_retention	16653433	16655625	.	-	.	gene_id "intron_retention.208"; transcript_id "intron_retention.208"; gene_name "ENSG00000269399.1"; flanks "16655625-,16653434^"; structure "0,1^2-"; splice_chain ",16655075^16654416-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.209983";
chr19	undefined	intron_retention	41937222	41938313	.	-	.	gene_id "intron_retention.212"; transcript_id "intron_retention.212"; gene_name "ENSG00000105341.14"; flanks "41938313-,41937223^"; structure "0,1^2-"; splice_chain ",41938220^41937793-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.879201";
chr19	undefined	intron_retention	42734337	42735019	.	-	.	gene_id "intron_retention.213"; transcript_id "intron_retention.213"; gene_name "ENSG00000105723.7"; flanks "42735019-,42734338^"; structure "0,1^2-"; splice_chain ",42734831^42734543-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.743205";
chr19	undefined	intron_retention	49299403	49299759	.	-	.	gene_id "intron_retention.214"; transcript_id "intron_retention.214"; gene_name "ENSG00000105552.10"; flanks "49299759-,49299404^"; structure "0,1^2-"; splice_chain ",49299685^49299586-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.845834";
chr19	undefined	intron_retention	51532347	51532713	.	-	.	gene_id "intron_retention.215"; transcript_id "intron_retention.215"; gene_name "ENSG00000186474.11"; flanks "51532713-,51532348^"; structure "0,1^2-"; splice_chain ",51532598^51532468-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.278115";
chr2	undefined	intron_retention	9244163	9244710	.	+	.	gene_id "intron_retention.216"; transcript_id "intron_retention.216"; gene_name "ENSG00000242136.1"; flanks "9244164-,9244710^"; structure "0,1^2-"; splice_chain ",9244289^9244565-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.382442";
chr2	undefined	intron_retention	109111746	109113565	.	+	.	gene_id "intron_retention.218"; transcript_id "intron_retention.218"; gene_name "ENSG00000135968.15"; flanks "109111747-,109113565^"; structure "0,1^2-"; splice_chain ",109111941^109113426-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.825287";
chr2	undefined	intron_retention	219231746	219232241	.	+	.	gene_id "intron_retention.219"; transcript_id "intron_retention.219"; gene_name "ENSG00000158428.3"; flanks "219231747-,219232241^"; structure "0,1^2-"; splice_chain ",219231823^219232153-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.558234";
chr2	undefined	intron_retention	220094478	220095127	.	+	.	gene_id "intron_retention.221"; transcript_id "intron_retention.221"; gene_name "ENSG00000163516.9"; flanks "220094479-,220095127^"; structure "0,1^2-"; splice_chain ",220094622^220094950-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.291370";
chr2	undefined	intron_retention	220094478	220095127	.	+	.	gene_id "intron_retention.222"; transcript_id "intron_retention.222"; gene_name "ENSG00000163516.9"; flanks "220094479-,220095127^"; structure "0,1^2-"; splice_chain ",220094680^220094950-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.847781";
chr2	undefined	intron_retention	220094478	220095127	.	+	.	gene_id "intron_retention.223"; transcript_id "intron_retention.223"; gene_name "ENSG00000163516.9"; flanks "220094479-,220095127^"; structure "0,1^2-"; splice_chain ",220094702^220094950-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.936066";
chr2	undefined	intron_retention	220097800	220098155	.	+	.	gene_id "intron_retention.224"; transcript_id "intron_retention.224"; gene_name "ENSG00000163516.9"; flanks "220097801-,220098155^"; structure "0,1^2-"; splice_chain ",220097913^220098008-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.621286";
chr2	undefined	intron_retention	220099547	220100307	.	+	.	gene_id "intron_retention.225"; transcript_id "intron_retention.225"; gene_name "ENSG00000163516.9"; flanks "220099548-,220100307^"; structure "0,1^2-"; splice_chain ",220100034^220100196-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.346168";
chr2	undefined	intron_retention	220100731	220101391	.	+	.	gene_id "intron_retention.226"; transcript_id "intron_retention.226"; gene_name "ENSG00000163516.9"; flanks "220100732-,220101391^"; structure "0,1^2-"; splice_chain ",220100817^220101044-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.460435";
chr2	undefined	intron_retention	232258191	232259695	.	+	.	gene_id "intron_retention.227"; transcript_id "intron_retention.227"; gene_name "ENSG00000224376.1"; flanks "232258192-,232259695^"; structure "0,1^2-"; splice_chain ",232258621^232259366-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.386645";
chr2	undefined	intron_retention	232258191	232259695	.	+	.	gene_id "intron_retention.228"; transcript_id "intron_retention.228"; gene_name "ENSG00000224376.1"; flanks "232258192-,232259695^"; structure "0,1^2-"; splice_chain ",232258621^232259492-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.428440";
chr2	undefined	intron_retention	241405474	241407493	.	+	.	gene_id "intron_retention.229"; transcript_id "intron_retention.229"; gene_name "ENSG00000063660.4"; flanks "241405475-,241407493^"; structure "0,1^2-"; splice_chain ",241405786^241405863-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.608247";
chr2	undefined	intron_retention	4007153	4008146	.	-	.	gene_id "intron_retention.230"; transcript_id "intron_retention.230"; gene_name "ENSG00000237401.2"; flanks "4008146-,4007154^"; structure "0,1^2-"; splice_chain ",4007506^4007226-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.935582";
chr2	undefined	intron_retention	4007153	4008146	.	-	.	gene_id "intron_retention.231"; transcript_id "intron_retention.231"; gene_name "ENSG00000237401.2"; flanks "4008146-,4007154^"; structure "0,1^2-"; splice_chain ",4007506^4007364-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.500626";
chr2	undefined	intron_retention	27706738	27707133	.	-	.	gene_id "intron_retention.232"; transcript_id "intron_retention.232"; gene_name "ENSG00000138002.10"; flanks "27707133-,27706739^"; structure "0,1^2-"; splice_chain ",27707094^27706804-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.494824";
chr2	undefined	intron_retention	46840832	46842324	.	-	.	gene_id "intron_retention.233"; transcript_id "intron_retention.233"; gene_name "ENSG00000151665.8"; flanks "46842324-,46840833^"; structure "0,1^2-"; splice_chain ",46842076^46840924-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.792459";
chr2	undefined	intron_retention	46840832	46844258	.	-	.	gene_id "intron_retention.234"; transcript_id "intron_retention.234"; gene_name "ENSG00000151665.8"; flanks "46844258-,46840833^"; structure "0,1^2-"; splice_chain ",46843726^46842324-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.448249";
chr2	undefined	intron_retention	46840832	46844258	.	-	.	gene_id "intron_retention.235"; transcript_id "intron_retention.235"; gene_name "ENSG00000151665.8"; flanks "46844258-,46840833^"; structure "0,1^2-"; splice_chain ",46844109^46842324-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.564944";
chr2	undefined	intron_retention	61709514	61710226	.	-	.	gene_id "intron_retention.236"; transcript_id "intron_retention.236"; gene_name "ENSG00000082898.12"; flanks "61710226-,61709515^"; structure "0,1^2-"; splice_chain ",61710092^61709674-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.621612";
chr2	undefined	intron_retention	61719701	61720188	.	-	.	gene_id "intron_retention.237"; transcript_id "intron_retention.237"; gene_name "ENSG00000082898.12"; flanks "61720188-,61719702^"; structure "0,1^2-"; splice_chain ",61720050^61719883-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.340397";
chr2	undefined	intron_retention	61725807	61726048	.	-	.	gene_id "intron_retention.238"; transcript_id "intron_retention.238"; gene_name "ENSG00000082898.12"; flanks "61726048-,61725808^"; structure "0,1^2-"; splice_chain ",61726000^61725927-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.370121";
chr2	undefined	intron_retention	79362628	79363202	.	-	.	gene_id "intron_retention.239"; transcript_id "intron_retention.239"; gene_name "ENSG00000204787.4"; flanks "79363202-,79362629^"; structure "0,1^2-"; splice_chain ",79363091^79362889-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.549226";
chr2	undefined	intron_retention	79365092	79365553	.	-	.	gene_id "intron_retention.241"; transcript_id "intron_retention.241"; gene_name "ENSG00000204787.4"; flanks "79365553-,79365093^"; structure "0,1^2-"; splice_chain ",79365498^79365202-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.369264";
chr2	undefined	intron_retention	88874183	88874964	.	-	.	gene_id "intron_retention.243"; transcript_id "intron_retention.243"; gene_name "ENSG00000172071.7"; flanks "88874964-,88874184^"; structure "0,1^2-"; splice_chain ",88874879^88874595-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.517253";
chr2	undefined	intron_retention	177042438	177043012	.	-	.	gene_id "intron_retention.245"; transcript_id "intron_retention.245"; gene_name "ENSG00000224189.2"; flanks "177043012-,177042439^"; structure "0,1^2-"; splice_chain ",177042731^177042549-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.805330";
chr2	undefined	intron_retention	177042438	177043012	.	-	.	gene_id "intron_retention.246"; transcript_id "intron_retention.246"; gene_name "ENSG00000224189.2"; flanks "177043012-,177042439^"; structure "0,1^2-"; splice_chain ",177042743^177042549-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.755785";
chr2	undefined	intron_retention	242436714	242437102	.	-	.	gene_id "intron_retention.253"; transcript_id "intron_retention.253"; gene_name "ENSG00000115694.10"; flanks "242437102-,242436715^"; structure "0,1^2-"; splice_chain ",242437031^242436793-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.561201";
chr2	undefined	intron_retention	242438671	242439696	.	-	.	gene_id "intron_retention.254"; transcript_id "intron_retention.254"; gene_name "ENSG00000115694.10"; flanks "242439696-,242438672^"; structure "0,1^2-"; splice_chain ",242439588^242438829-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.307460";
chr20	undefined	intron_retention	2843224	2843580	.	+	.	gene_id "intron_retention.255"; transcript_id "intron_retention.255"; gene_name "ENSG00000215305.5"; flanks "2843225-,2843580^"; structure "0,1^2-"; splice_chain ",2843356^2843453-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.742673";
chr20	undefined	intron_retention	2844594	2844933	.	+	.	gene_id "intron_retention.256"; transcript_id "intron_retention.256"; gene_name "ENSG00000215305.5"; flanks "2844595-,2844933^"; structure "0,1^2-"; splice_chain ",2844729^2844825-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.351917";
chr22	undefined	intron_retention	20748404	20748952	.	+	.	gene_id "intron_retention.257"; transcript_id "intron_retention.257"; gene_name "ENSG00000185252.13"; flanks "20748405-,20748952^"; structure "0,1^2-"; splice_chain ",20748624^20748853-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.919137";
chr22	undefined	intron_retention	45204186	45204612	.	+	.	gene_id "intron_retention.258"; transcript_id "intron_retention.258"; gene_name "ENSG00000241484.5"; flanks "45204187-,45204612^"; structure "0,1^2-"; splice_chain ",45204318^45204552-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.845673";
chr22	undefined	intron_retention	21829499	21830449	.	-	.	gene_id "intron_retention.260"; transcript_id "intron_retention.260"; gene_name "ENSG00000183506.12"; flanks "21830449-,21829500^"; structure "0,1^2-"; splice_chain ",21830281^21829589-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.476555";
chr22	undefined	intron_retention	21829499	21830449	.	-	.	gene_id "intron_retention.261"; transcript_id "intron_retention.261"; gene_name "ENSG00000183506.12"; flanks "21830449-,21829500^"; structure "0,1^2-"; splice_chain ",21830291^21829589-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.471895";
chr22	undefined	intron_retention	21829499	21831053	.	-	.	gene_id "intron_retention.262"; transcript_id "intron_retention.262"; gene_name "ENSG00000183506.12"; flanks "21831053-,21829500^"; structure "0,1^2-"; splice_chain ",21830933^21830449-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.635118";
chr22	undefined	intron_retention	30734777	30735168	.	-	.	gene_id "intron_retention.265"; transcript_id "intron_retention.265"; gene_name "ENSG00000099995.14"; flanks "30735168-,30734778^"; structure "0,1^2-"; splice_chain ",30735119^30735023-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.355634";
chr22	undefined	intron_retention	51007289	51007850	.	-	.	gene_id "intron_retention.266"; transcript_id "intron_retention.266"; gene_name "ENSG00000205560.8"; flanks "51007850-,51007290^"; structure "0,1^2-"; splice_chain ",51007765^51007510-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.349912";
chr22	undefined	intron_retention	51014964	51015463	.	-	.	gene_id "intron_retention.267"; transcript_id "intron_retention.267"; gene_name "ENSG00000205560.8"; flanks "51015463-,51014965^"; structure "0,1^2-"; splice_chain ",51015286^51015022-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.852278";
chr22	undefined	intron_retention	51014964	51015463	.	-	.	gene_id "intron_retention.268"; transcript_id "intron_retention.268"; gene_name "ENSG00000205560.8"; flanks "51015463-,51014965^"; structure "0,1^2-"; splice_chain ",51015286^51015066-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.638090";
chr22	undefined	intron_retention	51018155	51018511	.	-	.	gene_id "intron_retention.269"; transcript_id "intron_retention.269"; gene_name "ENSG00000100288.15"; flanks "51018511-,51018156^"; structure "0,1^2-"; splice_chain ",51018403^51018231-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.968485";
chr22	undefined	intron_retention	51018155	51018511	.	-	.	gene_id "intron_retention.270"; transcript_id "intron_retention.270"; gene_name "ENSG00000100288.15"; flanks "51018511-,51018156^"; structure "0,1^2-"; splice_chain ",51018486^51018231-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.695473";
chr22	undefined	intron_retention	51018155	51018511	.	-	.	gene_id "intron_retention.271"; transcript_id "intron_retention.271"; gene_name "ENSG00000100288.15"; flanks "51018511-,51018156^"; structure "0,1^2-"; splice_chain ",51018403^51018259-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.811461";
chr22	undefined	intron_retention	51018618	51018845	.	-	.	gene_id "intron_retention.272"; transcript_id "intron_retention.272"; gene_name "ENSG00000100288.15"; flanks "51018845-,51018619^"; structure "0,1^2-"; splice_chain ",51018787^51018700-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.697273";
chr22	undefined	intron_retention	51019848	51020291	.	-	.	gene_id "intron_retention.273"; transcript_id "intron_retention.273"; gene_name "ENSG00000100288.15"; flanks "51020291-,51019849^"; structure "0,1^2-"; splice_chain ",51020178^51019982-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.281251";
chr22	undefined	intron_retention	51019848	51020524	.	-	.	gene_id "intron_retention.274"; transcript_id "intron_retention.274"; gene_name "ENSG00000100288.15"; flanks "51020524-,51019849^"; structure "0,1^2-"; splice_chain ",51020458^51020291-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.447199";
chr22	undefined	intron_retention	51019848	51020786	.	-	.	gene_id "intron_retention.275"; transcript_id "intron_retention.275"; gene_name "ENSG00000100288.15"; flanks "51020786-,51019849^"; structure "0,1^2-"; splice_chain ",51020678^51020291-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.225932";
chr22	undefined	intron_retention	51019848	51021428	.	-	.	gene_id "intron_retention.277"; transcript_id "intron_retention.277"; gene_name "ENSG00000100288.15"; flanks "51021428-,51019849^"; structure "0,1^2-"; splice_chain ",51020987^51020786-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.845530";
chr3	undefined	intron_retention	8787211	8788451	.	+	.	gene_id "intron_retention.278"; transcript_id "intron_retention.278"; gene_name "ENSG00000182533.6"; flanks "8787212-,8788451^"; structure "0,1^2-"; splice_chain ",8787559^8787656-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.410472";
chr3	undefined	intron_retention	51749077	51750153	.	+	.	gene_id "intron_retention.285"; transcript_id "intron_retention.285"; gene_name "ENSG00000164082.10"; flanks "51749078-,51750153^"; structure "0,1^2-"; splice_chain ",51749199^51750034-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.824597";
chr3	undefined	intron_retention	97662069	97663807	.	+	.	gene_id "intron_retention.286"; transcript_id "intron_retention.286"; gene_name "ENSG00000080200.5"; flanks "97662070-,97663807^"; structure "0,1^2-"; splice_chain ",97662414^97663678-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.860820";
chr3	undefined	intron_retention	119207775	119209565	.	+	.	gene_id "intron_retention.287"; transcript_id "intron_retention.287"; gene_name "ENSG00000163389.6"; flanks "119207776-,119209565^"; structure "0,1^2-"; splice_chain ",119207834^119209398-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.222470";
chr3	undefined	intron_retention	33438236	33438627	.	-	.	gene_id "intron_retention.288"; transcript_id "intron_retention.288"; gene_name "ENSG00000153560.7"; flanks "33438627-,33438237^"; structure "0,1^2-"; splice_chain ",33438537^33438370-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.406310";
chr3	undefined	intron_retention	49460378	49462307	.	-	.	gene_id "intron_retention.291"; transcript_id "intron_retention.291"; gene_name "ENSG00000145029.7"; flanks "49462307-,49460379^"; structure "0,1^2-"; splice_chain ",49461508^49460996-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.299360";
chr3	undefined	intron_retention	49460378	49462486	.	-	.	gene_id "intron_retention.292"; transcript_id "intron_retention.292"; gene_name "ENSG00000145029.7"; flanks "49462486-,49460379^"; structure "0,1^2-"; splice_chain ",49462382^49462307-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.259059";
chr3	undefined	intron_retention	49460378	49462871	.	-	.	gene_id "intron_retention.293"; transcript_id "intron_retention.293"; gene_name "ENSG00000145029.7"; flanks "49462871-,49460379^"; structure "0,1^2-"; splice_chain ",49462800^49462486-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.388898";
chr3	undefined	intron_retention	49462381	49462871	.	-	.	gene_id "intron_retention.294"; transcript_id "intron_retention.294"; gene_name "ENSG00000145029.7"; flanks "49462871-,49462382^"; structure "0,1^2-"; splice_chain ",49462800^49462579-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.612676";
chr3	undefined	intron_retention	57582800	57583135	.	-	.	gene_id "intron_retention.295"; transcript_id "intron_retention.295"; gene_name "ENSG00000168374.6"; flanks "57583135-,57582801^"; structure "0,1^2-"; splice_chain ",57583059^57582950-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.862853";
chr3	undefined	intron_retention	73431583	73434081	.	-	.	gene_id "intron_retention.296"; transcript_id "intron_retention.296"; gene_name "ENSG00000121440.10"; flanks "73434081-,73431584^"; structure "0,1^2-"; splice_chain ",73433800^73432956-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.886107";
chr3	undefined	intron_retention	124944404	124952783	.	-	.	gene_id "intron_retention.297"; transcript_id "intron_retention.297"; gene_name "ENSG00000163848.14"; flanks "124952783-,124944405^"; structure "0,1^2-"; splice_chain ",124951953^124951498-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.699797";
chr3	undefined	intron_retention	125725197	125726068	.	-	.	gene_id "intron_retention.298"; transcript_id "intron_retention.298"; gene_name "ENSG00000114544.11"; flanks "125726068-,125725198^"; structure "0,1^2-"; splice_chain ",125725957^125725407-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.803181";
chr4	undefined	intron_retention	657558	658010	.	+	.	gene_id "intron_retention.300"; transcript_id "intron_retention.300"; gene_name "ENSG00000133256.8"; flanks "657559-,658010^"; structure "0,1^2-"; splice_chain ",657659^657903-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.725890";
chr4	undefined	intron_retention	78531767	78532988	.	+	.	gene_id "intron_retention.301"; transcript_id "intron_retention.301"; gene_name "ENSG00000156234.7"; flanks "78531768-,78532988^"; structure "0,1^2-"; splice_chain ",78531848^78532142-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.258973";
chr4	undefined	intron_retention	2932287	2933001	.	-	.	gene_id "intron_retention.303"; transcript_id "intron_retention.303"; gene_name "ENSG00000109736.10"; flanks "2933001-,2932288^"; structure "0,1^2-"; splice_chain ",2932954^2932877-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.658804";
chr4	undefined	intron_retention	2933101	2933390	.	-	.	gene_id "intron_retention.304"; transcript_id "intron_retention.304"; gene_name "ENSG00000109736.10"; flanks "2933390-,2933102^"; structure "0,1^2-"; splice_chain ",2933282^2933192-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.626364";
chr4	undefined	intron_retention	2933101	2933663	.	-	.	gene_id "intron_retention.305"; transcript_id "intron_retention.305"; gene_name "ENSG00000109736.10"; flanks "2933663-,2933102^"; structure "0,1^2-"; splice_chain ",2933552^2933192-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.774473";
chr4	undefined	intron_retention	2933101	2933663	.	-	.	gene_id "intron_retention.306"; transcript_id "intron_retention.306"; gene_name "ENSG00000109736.10"; flanks "2933663-,2933102^"; structure "0,1^2-"; splice_chain ",2933552^2933390-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.814035";
chr4	undefined	intron_retention	2933101	2933880	.	-	.	gene_id "intron_retention.307"; transcript_id "intron_retention.307"; gene_name "ENSG00000109736.10"; flanks "2933880-,2933102^"; structure "0,1^2-"; splice_chain ",2933772^2933663-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.640741";
chr4	undefined	intron_retention	2934326	2934936	.	-	.	gene_id "intron_retention.308"; transcript_id "intron_retention.308"; gene_name "ENSG00000109736.10"; flanks "2934936-,2934327^"; structure "0,1^2-"; splice_chain ",2934833^2934417-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.988067";
chr4	undefined	intron_retention	2934326	2934936	.	-	.	gene_id "intron_retention.309"; transcript_id "intron_retention.309"; gene_name "ENSG00000109736.10"; flanks "2934936-,2934327^"; structure "0,1^2-"; splice_chain ",2934833^2934485-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.676517";
chr4	undefined	intron_retention	3948870	3949947	.	-	.	gene_id "intron_retention.310"; transcript_id "intron_retention.310"; gene_name "ENSG00000251669.1"; flanks "3949947-,3948871^"; structure "0,1^2-"; splice_chain ",3949817^3949734-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.238200";
chr4	undefined	intron_retention	6382723	6383597	.	-	.	gene_id "intron_retention.311"; transcript_id "intron_retention.311"; gene_name "ENSG00000074211.9"; flanks "6383597-,6382724^"; structure "0,1^2-"; splice_chain ",6383504^6382821-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.244296";
chr4	undefined	intron_retention	69054145	69057037	.	-	.	gene_id "intron_retention.312"; transcript_id "intron_retention.312"; gene_name "ENSG00000250026.1"; flanks "69057037-,69054146^"; structure "0,1^2-"; splice_chain ",69056966^69054334-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.623651";
chr5	undefined	intron_retention	54459882	54460752	.	+	.	gene_id "intron_retention.314"; transcript_id "intron_retention.314"; gene_name "ENSG00000164294.9"; flanks "54459883-,54460752^"; structure "0,1^2-"; splice_chain ",54460007^54460428-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.378321";
chr5	undefined	intron_retention	134181702	134182553	.	+	.	gene_id "intron_retention.315"; transcript_id "intron_retention.315"; gene_name "ENSG00000181904.8"; flanks "134181703-,134182553^"; structure "0,1^2-"; splice_chain ",134181902^134182353-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.151447";
chr5	undefined	intron_retention	134190587	134194799	.	+	.	gene_id "intron_retention.316"; transcript_id "intron_retention.316"; gene_name "ENSG00000181904.8"; flanks "134190588-,134194799^"; structure "0,1^2-"; splice_chain ",134190852^134193047-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.776913";
chr5	undefined	intron_retention	134190587	134194799	.	+	.	gene_id "intron_retention.317"; transcript_id "intron_retention.317"; gene_name "ENSG00000181904.8"; flanks "134190588-,134194799^"; structure "0,1^2-"; splice_chain ",134191017^134193047-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.913836";
chr5	undefined	intron_retention	137517110	137517200	.	+	.	gene_id "intron_retention.318"; transcript_id "intron_retention.318"; gene_name "ENSG00000112984.7"; flanks "137517111-,137517200^"; structure "0,1^2-"; splice_chain ",137517137^137517192-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.450633";
chr5	undefined	intron_retention	140705776	140708924	.	+	.	gene_id "intron_retention.319"; transcript_id "intron_retention.319"; gene_name "ENSG00000272070.1"; flanks "140705777-,140708924^"; structure "0,1^2-"; splice_chain ",140706204^140707337-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.289753";
chr5	undefined	intron_retention	177631507	177632047	.	+	.	gene_id "intron_retention.320"; transcript_id "intron_retention.320"; gene_name "ENSG00000197451.6"; flanks "177631508-,177632047^"; structure "0,1^2-"; splice_chain ",177631741^177631816-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.342222";
chr5	undefined	intron_retention	64885506	64887329	.	-	.	gene_id "intron_retention.321"; transcript_id "intron_retention.321"; gene_name "ENSG00000113595.10"; flanks "64887329-,64885507^"; structure "0,1^2-"; splice_chain ",64887275^64886129-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.219118";
chr5	undefined	intron_retention	64885506	64887775	.	-	.	gene_id "intron_retention.322"; transcript_id "intron_retention.322"; gene_name "ENSG00000113595.10"; flanks "64887775-,64885507^"; structure "0,1^2-"; splice_chain ",64887670^64887329-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.221617";
chr5	undefined	intron_retention	64885506	64887775	.	-	.	gene_id "intron_retention.323"; transcript_id "intron_retention.323"; gene_name "ENSG00000113595.10"; flanks "64887775-,64885507^"; structure "0,1^2-"; splice_chain ",64887699^64887329-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.834965";
chr5	undefined	intron_retention	141052579	141053037	.	-	.	gene_id "intron_retention.324"; transcript_id "intron_retention.324"; gene_name "ENSG00000120318.11"; flanks "141053037-,141052580^"; structure "0,1^2-"; splice_chain ",141052968^141052700-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.509768";
chr5	undefined	intron_retention	178029664	178030935	.	-	.	gene_id "intron_retention.325"; transcript_id "intron_retention.325"; gene_name "ENSG00000113240.8"; flanks "178030935-,178029665^"; structure "0,1^2-"; splice_chain ",178030845^178030758-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.555143";
chr5	undefined	intron_retention	178029664	178032383	.	-	.	gene_id "intron_retention.326"; transcript_id "intron_retention.326"; gene_name "ENSG00000113240.8"; flanks "178032383-,178029665^"; structure "0,1^2-"; splice_chain ",178032304^178030935-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.461643";
chr5	undefined	intron_retention	178044344	178045779	.	-	.	gene_id "intron_retention.327"; transcript_id "intron_retention.327"; gene_name "ENSG00000113240.8"; flanks "178045779-,178044345^"; structure "0,1^2-"; splice_chain ",178045557^178044435-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.973291";
chr6	undefined	intron_retention	2989761	2990582	.	+	.	gene_id "intron_retention.328"; transcript_id "intron_retention.328"; gene_name "ENSG00000244041.3"; flanks "2989762-,2990582^"; structure "0,1^2-"; splice_chain ",2989967^2990103-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.738193";
chr6	undefined	intron_retention	31795511	31796039	.	+	.	gene_id "intron_retention.329"; transcript_id "intron_retention.329"; gene_name "ENSG00000204388.5"; flanks "31795512-,31796039^"; structure "0,1^2-"; splice_chain ",31795802^31796034-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.344272";
chr6	undefined	intron_retention	31795511	31798031	.	+	.	gene_id "intron_retention.330"; transcript_id "intron_retention.330"; gene_name "ENSG00000204388.5"; flanks "31795512-,31798031^"; structure "0,1^2-"; splice_chain ",31796039^31796082-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.375000";
chr6	undefined	intron_retention	31927073	31927896	.	+	.	gene_id "intron_retention.331"; transcript_id "intron_retention.331"; gene_name "ENSG00000204351.7"; flanks "31927074-,31927896^"; structure "0,1^2-"; splice_chain ",31927177^31927787-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.305983";
chr6	undefined	intron_retention	31928972	31929452	.	+	.	gene_id "intron_retention.332"; transcript_id "intron_retention.332"; gene_name "ENSG00000204351.7"; flanks "31928973-,31929452^"; structure "0,1^2-"; splice_chain ",31929163^31929324-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.476880";
chr6	undefined	intron_retention	31937056	31937532	.	+	.	gene_id "intron_retention.333"; transcript_id "intron_retention.333"; gene_name "ENSG00000204351.7"; flanks "31937057-,31937532^"; structure "0,1^2-"; splice_chain ",31937093^31937292-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.645803";
chr6	undefined	intron_retention	31937056	31937532	.	+	.	gene_id "intron_retention.334"; transcript_id "intron_retention.334"; gene_name "ENSG00000204351.7"; flanks "31937057-,31937532^"; structure "0,1^2-"; splice_chain ",31937197^31937292-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.327518";
chr6	undefined	intron_retention	33243952	33244287	.	+	.	gene_id "intron_retention.335"; transcript_id "intron_retention.335"; gene_name "ENSG00000231500.2"; flanks "33243953-,33244287^"; structure "0,1^2-"; splice_chain ",33244044^33244168-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.659190";
chr6	undefined	intron_retention	46644119	46645930	.	+	.	gene_id "intron_retention.336"; transcript_id "intron_retention.336"; gene_name "ENSG00000153291.11"; flanks "46644120-,46645930^"; structure "0,1^2-"; splice_chain ",46644480^46645348-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.270764";
chr6	undefined	intron_retention	112375274	112375608	.	+	.	gene_id "intron_retention.337"; transcript_id "intron_retention.337"; gene_name "ENSG00000112761.14"; flanks "112375275-,112375608^"; structure "0,1^2-"; splice_chain ",112375364^112375538-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.750598";
chr6	undefined	intron_retention	112375274	112375608	.	+	.	gene_id "intron_retention.338"; transcript_id "intron_retention.338"; gene_name "ENSG00000112761.14"; flanks "112375275-,112375608^"; structure "0,1^2-"; splice_chain ",112375373^112375538-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.756307";
chr6	undefined	intron_retention	30710975	30712325	.	-	.	gene_id "intron_retention.340"; transcript_id "intron_retention.340"; gene_name "ENSG00000137331.11"; flanks "30712325-,30710976^"; structure "0,1^2-"; splice_chain ",30712086^30711973-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.313131";
chr6	undefined	intron_retention	31938119	31938602	.	-	.	gene_id "intron_retention.341"; transcript_id "intron_retention.341"; gene_name "ENSG00000204348.5"; flanks "31938602-,31938120^"; structure "0,1^2-"; splice_chain ",31938370^31938155-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.973603";
chr6	undefined	intron_retention	31938119	31938602	.	-	.	gene_id "intron_retention.342"; transcript_id "intron_retention.342"; gene_name "ENSG00000204348.5"; flanks "31938602-,31938120^"; structure "0,1^2-"; splice_chain ",31938383^31938255-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.317969";
chr6	undefined	intron_retention	31938119	31938924	.	-	.	gene_id "intron_retention.343"; transcript_id "intron_retention.343"; gene_name "ENSG00000204348.5"; flanks "31938924-,31938120^"; structure "0,1^2-"; splice_chain ",31938689^31938529-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.774269";
chr6	undefined	intron_retention	31938119	31938924	.	-	.	gene_id "intron_retention.344"; transcript_id "intron_retention.344"; gene_name "ENSG00000204348.5"; flanks "31938924-,31938120^"; structure "0,1^2-"; splice_chain ",31938689^31938602-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.664395";
chr6	undefined	intron_retention	31938119	31939462	.	-	.	gene_id "intron_retention.345"; transcript_id "intron_retention.345"; gene_name "ENSG00000204348.5"; flanks "31939462-,31938120^"; structure "0,1^2-"; splice_chain ",31939097^31938916-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.864902";
chr6	undefined	intron_retention	31938119	31939462	.	-	.	gene_id "intron_retention.346"; transcript_id "intron_retention.346"; gene_name "ENSG00000204348.5"; flanks "31939462-,31938120^"; structure "0,1^2-"; splice_chain ",31939097^31938924-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.503988";
chr7	undefined	intron_retention	6639459	6639987	.	+	.	gene_id "intron_retention.347"; transcript_id "intron_retention.347"; gene_name "ENSG00000146576.8"; flanks "6639460-,6639987^"; structure "0,1^2-"; splice_chain ",6639523^6639758-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.925991";
chr7	undefined	intron_retention	54617526	54620224	.	+	.	gene_id "intron_retention.349"; transcript_id "intron_retention.349"; gene_name "ENSG00000170419.6"; flanks "54617527-,54620224^"; structure "0,1^2-"; splice_chain ",54617863^54618446-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.748411";
chr7	undefined	intron_retention	75042066	75044076	.	+	.	gene_id "intron_retention.351"; transcript_id "intron_retention.351"; gene_name "ENSG00000223705.5"; flanks "75042067-,75044076^"; structure "0,1^2-"; splice_chain ",75042210^75043918-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.753746";
chr7	undefined	intron_retention	75042066	75044301	.	+	.	gene_id "intron_retention.352"; transcript_id "intron_retention.352"; gene_name "ENSG00000223705.5"; flanks "75042067-,75044301^"; structure "0,1^2-"; splice_chain ",75042210^75044163-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.748593";
chr7	undefined	intron_retention	75043917	75044301	.	+	.	gene_id "intron_retention.353"; transcript_id "intron_retention.353"; gene_name "ENSG00000223705.5"; flanks "75043918-,75044301^"; structure "0,1^2-"; splice_chain ",75044076^75044163-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.896278";
chr7	undefined	intron_retention	128848599	128849238	.	+	.	gene_id "intron_retention.354"; transcript_id "intron_retention.354"; gene_name "ENSG00000128602.5"; flanks "128848600-,128849238^"; structure "0,1^2-"; splice_chain ",128848692^128849130-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.624757";
chr7	undefined	intron_retention	148990467	148990853	.	+	.	gene_id "intron_retention.355"; transcript_id "intron_retention.355"; gene_name "ENSG00000244560.2"; flanks "148990468-,148990853^"; structure "0,1^2-"; splice_chain ",148990583^148990842-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.911904";
chr7	undefined	intron_retention	102234496	102235006	.	-	.	gene_id "intron_retention.356"; transcript_id "intron_retention.356"; gene_name "ENSG00000105808.13"; flanks "102235006-,102234497^"; structure "0,1^2-"; splice_chain ",102234894^102234689-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.634069";
chr7	undefined	intron_retention	102234496	102235006	.	-	.	gene_id "intron_retention.357"; transcript_id "intron_retention.357"; gene_name "ENSG00000105808.13"; flanks "102235006-,102234497^"; structure "0,1^2-"; splice_chain ",102234939^102234689-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.536539";
chr7	undefined	intron_retention	107569508	107570422	.	-	.	gene_id "intron_retention.358"; transcript_id "intron_retention.358"; gene_name "ENSG00000091136.9"; flanks "107570422-,107569509^"; structure "0,1^2-"; splice_chain ",107569857^107569650-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.831540";
chr7	undefined	intron_retention	127251588	127252054	.	-	.	gene_id "intron_retention.359"; transcript_id "intron_retention.359"; gene_name "ENSG00000106331.10"; flanks "127252054-,127251589^"; structure "0,1^2-"; splice_chain ",127251999^127251730-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.366573";
chr7	undefined	intron_retention	127251588	127252054	.	-	.	gene_id "intron_retention.360"; transcript_id "intron_retention.360"; gene_name "ENSG00000106331.10"; flanks "127252054-,127251589^"; structure "0,1^2-"; splice_chain ",127251999^127251902-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.760599";
chr7	undefined	intron_retention	127254933	127255780	.	-	.	gene_id "intron_retention.361"; transcript_id "intron_retention.361"; gene_name "ENSG00000106331.10"; flanks "127255780-,127254934^"; structure "0,1^2-"; splice_chain ",127255455^127255149-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.241360";
chr8	undefined	intron_retention	103572679	103573216	.	+	.	gene_id "intron_retention.362"; transcript_id "intron_retention.362"; gene_name "ENSG00000155087.3"; flanks "103572680-,103573216^"; structure "0,1^2-"; splice_chain ",103572800^103572989-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.444299";
chr8	undefined	intron_retention	22011654	22012144	.	-	.	gene_id "intron_retention.363"; transcript_id "intron_retention.363"; gene_name "ENSG00000168481.4"; flanks "22012144-,22011655^"; structure "0,1^2-"; splice_chain ",22012073^22011726-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.371573";
chr8	undefined	intron_retention	22011654	22012976	.	-	.	gene_id "intron_retention.364"; transcript_id "intron_retention.364"; gene_name "ENSG00000168481.4"; flanks "22012976-,22011655^"; structure "0,1^2-"; splice_chain ",22012905^22012144-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.330074";
chr8	undefined	intron_retention	99057054	99057627	.	-	.	gene_id "intron_retention.365"; transcript_id "intron_retention.365"; gene_name "ENSG00000156482.6"; flanks "99057627-,99057055^"; structure "0,1^2-"; splice_chain ",99057575^99057316-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.551231";
chr9	undefined	intron_retention	11986	12340	.	+	.	gene_id "intron_retention.366"; transcript_id "intron_retention.366"; gene_name "ENSG00000236875.2"; flanks "11987-,12340^"; structure "0,1^2-"; splice_chain ",12191^12293-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.358051";
chr9	undefined	intron_retention	43908111	43908523	.	+	.	gene_id "intron_retention.367"; transcript_id "intron_retention.367"; gene_name "ENSG00000154529.10"; flanks "43908112-,43908523^"; structure "0,1^2-"; splice_chain ",43908210^43908436-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.958771";
chr9	undefined	intron_retention	34709001	34709679	.	-	.	gene_id "intron_retention.369"; transcript_id "intron_retention.369"; gene_name "ENSG00000137077.3"; flanks "34709679-,34709002^"; structure "0,1^2-"; splice_chain ",34709497^34709424-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.681550";
chr9	undefined	intron_retention	35074923	35075322	.	-	.	gene_id "intron_retention.370"; transcript_id "intron_retention.370"; gene_name "ENSG00000221829.5"; flanks "35075322-,35074924^"; structure "0,1^2-"; splice_chain ",35075276^35075079-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.356913";
chr9	undefined	intron_retention	46685428	46687683	.	-	.	gene_id "intron_retention.372"; transcript_id "intron_retention.372"; gene_name "ENSG00000204802.3"; flanks "46687683-,46685429^"; structure "0,1^2-"; splice_chain ",46687373^46686829-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.617213";
chr9	undefined	intron_retention	46685428	46687683	.	-	.	gene_id "intron_retention.373"; transcript_id "intron_retention.373"; gene_name "ENSG00000204802.3"; flanks "46687683-,46685429^"; structure "0,1^2-"; splice_chain ",46687554^46686829-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.425913";
chr9	undefined	intron_retention	46685428	46688084	.	-	.	gene_id "intron_retention.374"; transcript_id "intron_retention.374"; gene_name "ENSG00000204802.3"; flanks "46688084-,46685429^"; structure "0,1^2-"; splice_chain ",46687799^46687683-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.207498";
chr9	undefined	intron_retention	125627627	125627936	.	-	.	gene_id "intron_retention.375"; transcript_id "intron_retention.375"; gene_name "ENSG00000056586.11"; flanks "125627936-,125627628^"; structure "0,1^2-"; splice_chain ",125627903^125627820-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.495729";
chrX	undefined	intron_retention	24380877	24383495	.	+	.	gene_id "intron_retention.377"; transcript_id "intron_retention.377"; gene_name "ENSG00000223731.1"; flanks "24380878-,24383495^"; structure "0,1^2-"; splice_chain ",24382348^24382541-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.689383";
chrX	undefined	intron_retention	153608301	153608727	.	+	.	gene_id "intron_retention.378"; transcript_id "intron_retention.378"; gene_name "ENSG00000102119.6"; flanks "153608302-,153608727^"; structure "0,1^2-"; splice_chain ",153608379^153608594-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.370318";
chrX	undefined	intron_retention	153609112	153609883	.	+	.	gene_id "intron_retention.379"; transcript_id "intron_retention.379"; gene_name "ENSG00000102119.6"; flanks "153609113-,153609883^"; structure "0,1^2-"; splice_chain ",153609162^153609242-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.260020";
chrX	undefined	intron_retention	2404454	2408813	.	-	.	gene_id "intron_retention.380"; transcript_id "intron_retention.380"; gene_name "ENSG00000214717.5"; flanks "2408813-,2404455^"; structure "0,1^2-"; splice_chain ",2406829^2405743-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.838752";
chrX	undefined	intron_retention	19930977	19932386	.	-	.	gene_id "intron_retention.382"; transcript_id "intron_retention.382"; gene_name "ENSG00000173681.12"; flanks "19932386-,19930978^"; structure "0,1^2-"; splice_chain ",19932270^19931597-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.795455";
chrX	undefined	intron_retention	19930977	19932544	.	-	.	gene_id "intron_retention.383"; transcript_id "intron_retention.383"; gene_name "ENSG00000173681.12"; flanks "19932544-,19930978^"; structure "0,1^2-"; splice_chain ",19932469^19932386-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.695491";
chrX	undefined	intron_retention	19930977	19933167	.	-	.	gene_id "intron_retention.384"; transcript_id "intron_retention.384"; gene_name "ENSG00000173681.12"; flanks "19933167-,19930978^"; structure "0,1^2-"; splice_chain ",19933057^19932544-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.332915";
chrX	undefined	intron_retention	134290460	134291428	.	-	.	gene_id "intron_retention.386"; transcript_id "intron_retention.386"; gene_name "ENSG00000169551.8"; flanks "134291428-,134290461^"; structure "0,1^2-"; splice_chain ",134291241^134290953-"; psi_gencode.v19.annotation.mult_iso_subsample_1000_genes.gtf.noPolyA.sorted "0.668225";