chr1 undefined intron_retention 54359986 54360220 . + . gene_id "intron_retention.1"; transcript_id "intron_retention.1"; gene_name "ENSG00000211452.6"; flanks "54359987-,54360220^"; structure "0,1^2-"; splice_chain ",54360028^54360112-"; psi_Aligned.out.sorted "0.683886"; chr1 undefined intron_retention 145578061 145578479 . + . gene_id "intron_retention.2"; transcript_id "intron_retention.2"; gene_name "ENSG00000131788.11"; flanks "145578062-,145578479^"; structure "0,1^2-"; splice_chain ",145578295^145578401-"; psi_Aligned.out.sorted "0.951877"; chr1 undefined intron_retention 145578061 145578721 . + . gene_id "intron_retention.3"; transcript_id "intron_retention.3"; gene_name "ENSG00000131788.11"; flanks "145578062-,145578721^"; structure "0,1^2-"; splice_chain ",145578479^145578637-"; psi_Aligned.out.sorted "0.596783"; chr1 undefined intron_retention 27425305 27427135 . - . gene_id "intron_retention.4"; transcript_id "intron_retention.4"; gene_name "ENSG00000090020.6"; flanks "27427135-,27425306^"; structure "0,1^2-"; splice_chain ",27425703^27425495-"; psi_Aligned.out.sorted "0.548357"; chr1 undefined intron_retention 41485897 41486605 . - . gene_id "intron_retention.5"; transcript_id "intron_retention.5"; gene_name "ENSG00000171790.11"; flanks "41486605-,41485898^"; structure "0,1^2-"; splice_chain ",41486536^41486450-"; psi_Aligned.out.sorted "0.387800"; chr1 undefined intron_retention 41485897 41487387 . - . gene_id "intron_retention.6"; transcript_id "intron_retention.6"; gene_name "ENSG00000171790.11"; flanks "41487387-,41485898^"; structure "0,1^2-"; splice_chain ",41487288^41486450-"; psi_Aligned.out.sorted "0.775781"; chr1 undefined intron_retention 41485897 41487387 . - . gene_id "intron_retention.8"; transcript_id "intron_retention.8"; gene_name "ENSG00000171790.11"; flanks "41487387-,41485898^"; structure "0,1^2-"; splice_chain ",41487202^41486605-"; psi_Aligned.out.sorted "0.531203"; chr1 undefined intron_retention 41485897 41487387 . - . gene_id "intron_retention.9"; transcript_id "intron_retention.9"; gene_name "ENSG00000171790.11"; flanks "41487387-,41485898^"; structure "0,1^2-"; splice_chain ",41487295^41486605-"; psi_Aligned.out.sorted "0.873341"; chr1 undefined intron_retention 153925046 153925310 . - . gene_id "intron_retention.11"; transcript_id "intron_retention.11"; gene_name "ENSG00000160741.12"; flanks "153925310-,153925047^"; structure "0,1^2-"; splice_chain ",153925281^153925111-"; psi_Aligned.out.sorted "0.970243"; chr1 undefined intron_retention 153925046 153925310 . - . gene_id "intron_retention.12"; transcript_id "intron_retention.12"; gene_name "ENSG00000160741.12"; flanks "153925310-,153925047^"; structure "0,1^2-"; splice_chain ",153925281^153925126-"; psi_Aligned.out.sorted "0.968878"; chr1 undefined intron_retention 158464191 158464676 . - . gene_id "intron_retention.14"; transcript_id "intron_retention.14"; gene_name "ENSG00000236656.1"; flanks "158464676-,158464192^"; structure "0,1^2-"; splice_chain ",158464445^158464344-"; psi_Aligned.out.sorted "0.187191"; chr10 undefined intron_retention 60047320 60049346 . + . gene_id "intron_retention.16"; transcript_id "intron_retention.16"; gene_name "ENSG00000122873.7"; flanks "60047321-,60049346^"; structure "0,1^2-"; splice_chain ",60047517^60048036-"; psi_Aligned.out.sorted "0.341112"; chr10 undefined intron_retention 30301728 30306846 . - . gene_id "intron_retention.18"; transcript_id "intron_retention.18"; gene_name "ENSG00000165757.8"; flanks "30306846-,30301729^"; structure "0,1^2-"; splice_chain ",30302412^30301979-"; psi_Aligned.out.sorted "0.170882"; chr10 undefined intron_retention 74092587 74095689 . - . gene_id "intron_retention.19"; transcript_id "intron_retention.19"; gene_name "ENSG00000148719.10"; flanks "74095689-,74092588^"; structure "0,1^2-"; splice_chain ",74095538^74094375-"; psi_Aligned.out.sorted "0.437416"; chr10 undefined intron_retention 74092587 74095689 . - . gene_id "intron_retention.20"; transcript_id "intron_retention.20"; gene_name "ENSG00000148719.10"; flanks "74095689-,74092588^"; structure "0,1^2-"; splice_chain ",74095592^74094375-"; psi_Aligned.out.sorted "0.672130"; chr10 undefined intron_retention 78644746 78647273 . - . gene_id "intron_retention.21"; transcript_id "intron_retention.21"; gene_name "ENSG00000156113.16"; flanks "78647273-,78644747^"; structure "0,1^2-"; splice_chain ",78647049^78644775-"; psi_Aligned.out.sorted "0.399785"; chr10 undefined intron_retention 80721010 80722151 . - . gene_id "intron_retention.22"; transcript_id "intron_retention.22"; gene_name "ENSG00000224596.3"; flanks "80722151-,80721011^"; structure "0,1^2-"; splice_chain ",80721656^80721164-"; psi_Aligned.out.sorted "0.495066"; chr11 undefined intron_retention 828229 828711 . + . gene_id "intron_retention.24"; transcript_id "intron_retention.24"; gene_name "ENSG00000177685.12"; flanks "828230-,828711^"; structure "0,1^2-"; splice_chain ",828259^828575-"; psi_Aligned.out.sorted "0.936642"; chr11 undefined intron_retention 3427728 3428927 . + . gene_id "intron_retention.25"; transcript_id "intron_retention.25"; gene_name "ENSG00000223756.2"; flanks "3427729-,3428927^"; structure "0,1^2-"; splice_chain ",3427840^3428852-"; psi_Aligned.out.sorted "0.661428"; chr11 undefined intron_retention 3427728 3428927 . + . gene_id "intron_retention.26"; transcript_id "intron_retention.26"; gene_name "ENSG00000223756.2"; flanks "3427729-,3428927^"; structure "0,1^2-"; splice_chain ",3427945^3428852-"; psi_Aligned.out.sorted "0.654867"; chr11 undefined intron_retention 57310113 57310847 . + . gene_id "intron_retention.27"; transcript_id "intron_retention.27"; gene_name "ENSG00000214872.4"; flanks "57310114-,57310847^"; structure "0,1^2-"; splice_chain ",57310653^57310732-"; psi_Aligned.out.sorted "0.565611"; chr11 undefined intron_retention 59855733 59856294 . + . gene_id "intron_retention.28"; transcript_id "intron_retention.28"; gene_name "ENSG00000149534.4"; flanks "59855734-,59856294^"; structure "0,1^2-"; splice_chain ",59856134^59856223-"; psi_Aligned.out.sorted "0.389114"; chr11 undefined intron_retention 64001365 64001753 . + . gene_id "intron_retention.29"; transcript_id "intron_retention.29"; gene_name "ENSG00000110011.9"; flanks "64001366-,64001753^"; structure "0,1^2-"; splice_chain ",64001452^64001545-"; psi_Aligned.out.sorted "0.641316"; chr11 undefined intron_retention 107974916 107978503 . + . gene_id "intron_retention.30"; transcript_id "intron_retention.30"; gene_name "ENSG00000166266.9"; flanks "107974917-,107978503^"; structure "0,1^2-"; splice_chain ",107975629^107976934-"; psi_Aligned.out.sorted "0.417633"; chr11 undefined intron_retention 115267473 115268246 . + . gene_id "intron_retention.31"; transcript_id "intron_retention.31"; gene_name "ENSG00000256315.1"; flanks "115267474-,115268246^"; structure "0,1^2-"; splice_chain ",115267609^115267984-"; psi_Aligned.out.sorted "0.264260"; chr11 undefined intron_retention 115267473 115268246 . + . gene_id "intron_retention.32"; transcript_id "intron_retention.32"; gene_name "ENSG00000256315.1"; flanks "115267474-,115268246^"; structure "0,1^2-"; splice_chain ",115267609^115267987-"; psi_Aligned.out.sorted "0.884118"; chr11 undefined intron_retention 115267473 115268376 . + . gene_id "intron_retention.33"; transcript_id "intron_retention.33"; gene_name "ENSG00000256315.1"; flanks "115267474-,115268376^"; structure "0,1^2-"; splice_chain ",115268246^115268301-"; psi_Aligned.out.sorted "0.780161"; chr11 undefined intron_retention 117073717 117074200 . + . gene_id "intron_retention.34"; transcript_id "intron_retention.34"; gene_name "ENSG00000149591.12"; flanks "117073718-,117074200^"; structure "0,1^2-"; splice_chain ",117073888^117074023-"; psi_Aligned.out.sorted "0.567737"; chr11 undefined intron_retention 117073717 117074200 . + . gene_id "intron_retention.35"; transcript_id "intron_retention.35"; gene_name "ENSG00000149591.12"; flanks "117073718-,117074200^"; structure "0,1^2-"; splice_chain ",117073909^117074023-"; psi_Aligned.out.sorted "0.390651"; chr11 undefined intron_retention 117074497 117075273 . + . gene_id "intron_retention.36"; transcript_id "intron_retention.36"; gene_name "ENSG00000149591.12"; flanks "117074498-,117075273^"; structure "0,1^2-"; splice_chain ",117074600^117074931-"; psi_Aligned.out.sorted "0.346947"; chr11 undefined intron_retention 118402811 118403176 . + . gene_id "intron_retention.37"; transcript_id "intron_retention.37"; gene_name "ENSG00000149582.11"; flanks "118402812-,118403176^"; structure "0,1^2-"; splice_chain ",118402914^118403050-"; psi_Aligned.out.sorted "0.921205"; chr11 undefined intron_retention 119056800 119057266 . + . gene_id "intron_retention.38"; transcript_id "intron_retention.38"; gene_name "ENSG00000172367.11"; flanks "119056801-,119057266^"; structure "0,1^2-"; splice_chain ",119056874^119057188-"; psi_Aligned.out.sorted "0.881270"; chr11 undefined intron_retention 119056800 119057266 . + . gene_id "intron_retention.39"; transcript_id "intron_retention.39"; gene_name "ENSG00000172367.11"; flanks "119056801-,119057266^"; structure "0,1^2-"; splice_chain ",119056950^119057188-"; psi_Aligned.out.sorted "0.965864"; chr11 undefined intron_retention 124077889 124078819 . + . gene_id "intron_retention.40"; transcript_id "intron_retention.40"; gene_name "ENSG00000239426.3"; flanks "124077890-,124078819^"; structure "0,1^2-"; splice_chain ",124078395^124078522-"; psi_Aligned.out.sorted "0.363822"; chr11 undefined intron_retention 2905228 2906696 . - . gene_id "intron_retention.42"; transcript_id "intron_retention.42"; gene_name "ENSG00000129757.8"; flanks "2906696-,2905229^"; structure "0,1^2-"; splice_chain ",2905900^2905364-"; psi_Aligned.out.sorted "0.329157"; chr11 undefined intron_retention 2905228 2906696 . - . gene_id "intron_retention.43"; transcript_id "intron_retention.43"; gene_name "ENSG00000129757.8"; flanks "2906696-,2905229^"; structure "0,1^2-"; splice_chain ",2906432^2905364-"; psi_Aligned.out.sorted "0.939314"; chr11 undefined intron_retention 2905228 2906979 . - . gene_id "intron_retention.44"; transcript_id "intron_retention.44"; gene_name "ENSG00000129757.8"; flanks "2906979-,2905229^"; structure "0,1^2-"; splice_chain ",2906864^2906696-"; psi_Aligned.out.sorted "0.911704"; chr11 undefined intron_retention 5684424 5686625 . - . gene_id "intron_retention.45"; transcript_id "intron_retention.45"; gene_name "ENSG00000132256.14"; flanks "5686625-,5684425^"; structure "0,1^2-"; splice_chain ",5686399^5685403-"; psi_Aligned.out.sorted "0.597805"; chr11 undefined intron_retention 5684424 5686912 . - . gene_id "intron_retention.46"; transcript_id "intron_retention.46"; gene_name "ENSG00000132256.14"; flanks "5686912-,5684425^"; structure "0,1^2-"; splice_chain ",5686886^5685403-"; psi_Aligned.out.sorted "0.506806"; chr11 undefined intron_retention 5684424 5686912 . - . gene_id "intron_retention.47"; transcript_id "intron_retention.47"; gene_name "ENSG00000132256.14"; flanks "5686912-,5684425^"; structure "0,1^2-"; splice_chain ",5686886^5686625-"; psi_Aligned.out.sorted "0.452708"; chr11 undefined intron_retention 6636401 6636793 . - . gene_id "intron_retention.50"; transcript_id "intron_retention.50"; gene_name "ENSG00000166340.10"; flanks "6636793-,6636402^"; structure "0,1^2-"; splice_chain ",6636673^6636560-"; psi_Aligned.out.sorted "0.208365"; chr11 undefined intron_retention 6637545 6638090 . - . gene_id "intron_retention.51"; transcript_id "intron_retention.51"; gene_name "ENSG00000166340.10"; flanks "6638090-,6637546^"; structure "0,1^2-"; splice_chain ",6637892^6637734-"; psi_Aligned.out.sorted "0.581697"; chr11 undefined intron_retention 6638205 6638659 . - . gene_id "intron_retention.52"; transcript_id "intron_retention.52"; gene_name "ENSG00000166340.10"; flanks "6638659-,6638206^"; structure "0,1^2-"; splice_chain ",6638532^6638384-"; psi_Aligned.out.sorted "0.520633"; chr11 undefined intron_retention 6640006 6640498 . - . gene_id "intron_retention.54"; transcript_id "intron_retention.54"; gene_name "ENSG00000166340.10"; flanks "6640498-,6640007^"; structure "0,1^2-"; splice_chain ",6640427^6640146-"; psi_Aligned.out.sorted "0.455872"; chr11 undefined intron_retention 10820759 10821156 . - . gene_id "intron_retention.55"; transcript_id "intron_retention.55"; gene_name "ENSG00000110321.11"; flanks "10821156-,10820760^"; structure "0,1^2-"; splice_chain ",10821099^10820971-"; psi_Aligned.out.sorted "0.225118"; chr11 undefined intron_retention 10821636 10821895 . - . gene_id "intron_retention.56"; transcript_id "intron_retention.56"; gene_name "ENSG00000110321.11"; flanks "10821895-,10821637^"; structure "0,1^2-"; splice_chain ",10821791^10821715-"; psi_Aligned.out.sorted "0.754616"; chr11 undefined intron_retention 10825445 10825750 . - . gene_id "intron_retention.57"; transcript_id "intron_retention.57"; gene_name "ENSG00000110321.11"; flanks "10825750-,10825446^"; structure "0,1^2-"; splice_chain ",10825684^10825597-"; psi_Aligned.out.sorted "0.244527"; chr11 undefined intron_retention 62363750 62364004 . - . gene_id "intron_retention.58"; transcript_id "intron_retention.58"; gene_name "ENSG00000149480.2"; flanks "62364004-,62363751^"; structure "0,1^2-"; splice_chain ",62363930^62363809-"; psi_Aligned.out.sorted "0.250312"; chr11 undefined intron_retention 62364787 62365184 . - . gene_id "intron_retention.59"; transcript_id "intron_retention.59"; gene_name "ENSG00000149480.2"; flanks "62365184-,62364788^"; structure "0,1^2-"; splice_chain ",62365082^62364887-"; psi_Aligned.out.sorted "0.389491"; chr11 undefined intron_retention 62365495 62365862 . - . gene_id "intron_retention.60"; transcript_id "intron_retention.60"; gene_name "ENSG00000149480.2"; flanks "62365862-,62365496^"; structure "0,1^2-"; splice_chain ",62365799^62365613-"; psi_Aligned.out.sorted "0.652908"; chr11 undefined intron_retention 118918959 118919275 . - . gene_id "intron_retention.61"; transcript_id "intron_retention.61"; gene_name "ENSG00000149428.14"; flanks "118919275-,118918960^"; structure "0,1^2-"; splice_chain ",118919188^118919082-"; psi_Aligned.out.sorted "0.500967"; chr11 undefined intron_retention 119229733 119230052 . - . gene_id "intron_retention.62"; transcript_id "intron_retention.62"; gene_name "ENSG00000036672.11"; flanks "119230052-,119229734^"; structure "0,1^2-"; splice_chain ",119229941^119229844-"; psi_Aligned.out.sorted "0.410574"; chr11 undefined intron_retention 124756359 124757109 . - . gene_id "intron_retention.63"; transcript_id "intron_retention.63"; gene_name "ENSG00000154133.10"; flanks "124757109-,124756360^"; structure "0,1^2-"; splice_chain ",124756873^124756718-"; psi_Aligned.out.sorted "0.388079"; chr11 undefined intron_retention 124756359 124757395 . - . gene_id "intron_retention.64"; transcript_id "intron_retention.64"; gene_name "ENSG00000154133.10"; flanks "124757395-,124756360^"; structure "0,1^2-"; splice_chain ",124757254^124757109-"; psi_Aligned.out.sorted "0.405478"; chr11 undefined intron_retention 124756359 124757736 . - . gene_id "intron_retention.65"; transcript_id "intron_retention.65"; gene_name "ENSG00000154133.10"; flanks "124757736-,124756360^"; structure "0,1^2-"; splice_chain ",124757629^124757395-"; psi_Aligned.out.sorted "0.394161"; chr11 undefined intron_retention 124766408 124766951 . - . gene_id "intron_retention.66"; transcript_id "intron_retention.66"; gene_name "ENSG00000154133.10"; flanks "124766951-,124766409^"; structure "0,1^2-"; splice_chain ",124766828^124766566-"; psi_Aligned.out.sorted "0.288880"; chr12 undefined intron_retention 3432514 3434509 . + . gene_id "intron_retention.67"; transcript_id "intron_retention.67"; gene_name "ENSG00000236908.2"; flanks "3432515-,3434509^"; structure "0,1^2-"; splice_chain ",3432618^3434256-"; psi_Aligned.out.sorted "0.350268"; chr12 undefined intron_retention 11708188 11710150 . + . gene_id "intron_retention.68"; transcript_id "intron_retention.68"; gene_name "ENSG00000247157.2"; flanks "11708189-,11710150^"; structure "0,1^2-"; splice_chain ",11709018^11709870-"; psi_Aligned.out.sorted "0.379392"; chr12 undefined intron_retention 52407470 52407727 . + . gene_id "intron_retention.69"; transcript_id "intron_retention.69"; gene_name "ENSG00000161835.6"; flanks "52407471-,52407727^"; structure "0,1^2-"; splice_chain ",52407564^52407661-"; psi_Aligned.out.sorted "0.468702"; chr12 undefined intron_retention 58013309 58014235 . + . gene_id "intron_retention.70"; transcript_id "intron_retention.70"; gene_name "ENSG00000135502.12"; flanks "58013310-,58014235^"; structure "0,1^2-"; splice_chain ",58013661^58014125-"; psi_Aligned.out.sorted "0.592860"; chr12 undefined intron_retention 58015045 58015625 . + . gene_id "intron_retention.71"; transcript_id "intron_retention.71"; gene_name "ENSG00000135502.12"; flanks "58015046-,58015625^"; structure "0,1^2-"; splice_chain ",58015210^58015473-"; psi_Aligned.out.sorted "0.503399"; chr12 undefined intron_retention 58017618 58017881 . + . gene_id "intron_retention.72"; transcript_id "intron_retention.72"; gene_name "ENSG00000135502.12"; flanks "58017619-,58017881^"; structure "0,1^2-"; splice_chain ",58017696^58017786-"; psi_Aligned.out.sorted "0.391069"; chr12 undefined intron_retention 69233053 69237612 . + . gene_id "intron_retention.73"; transcript_id "intron_retention.73"; gene_name "ENSG00000135679.17"; flanks "69233054-,69237612^"; structure "0,1^2-"; splice_chain ",69236304^69237544-"; psi_Aligned.out.sorted "0.789407"; chr12 undefined intron_retention 69233053 69237612 . + . gene_id "intron_retention.74"; transcript_id "intron_retention.74"; gene_name "ENSG00000135679.17"; flanks "69233054-,69237612^"; structure "0,1^2-"; splice_chain ",69237044^69237521-"; psi_Aligned.out.sorted "0.822617"; chr12 undefined intron_retention 69233053 69239214 . + . gene_id "intron_retention.75"; transcript_id "intron_retention.75"; gene_name "ENSG00000135679.17"; flanks "69233054-,69239214^"; structure "0,1^2-"; splice_chain ",69237612^69237714-"; psi_Aligned.out.sorted "0.819839"; chr12 undefined intron_retention 7086528 7086907 . - . gene_id "intron_retention.79"; transcript_id "intron_retention.79"; gene_name "ENSG00000111684.6"; flanks "7086907-,7086529^"; structure "0,1^2-"; splice_chain ",7086760^7086687-"; psi_Aligned.out.sorted "0.668367"; chr12 undefined intron_retention 7086528 7087669 . - . gene_id "intron_retention.80"; transcript_id "intron_retention.80"; gene_name "ENSG00000111684.6"; flanks "7087669-,7086529^"; structure "0,1^2-"; splice_chain ",7087583^7086687-"; psi_Aligned.out.sorted "0.846167"; chr12 undefined intron_retention 7086528 7087669 . - . gene_id "intron_retention.81"; transcript_id "intron_retention.81"; gene_name "ENSG00000111684.6"; flanks "7087669-,7086529^"; structure "0,1^2-"; splice_chain ",7087503^7086907-"; psi_Aligned.out.sorted "0.457447"; chr12 undefined intron_retention 11461154 11461816 . - . gene_id "intron_retention.82"; transcript_id "intron_retention.82"; gene_name "ENSG00000230657.2"; flanks "11461816-,11461155^"; structure "0,1^2-"; splice_chain ",11461583^11461375-"; psi_Aligned.out.sorted "0.739472"; chr12 undefined intron_retention 52979372 52979956 . - . gene_id "intron_retention.83"; transcript_id "intron_retention.83"; gene_name "ENSG00000170486.6"; flanks "52979956-,52979373^"; structure "0,1^2-"; splice_chain ",52979747^52979619-"; psi_Aligned.out.sorted "0.702067"; chr12 undefined intron_retention 53458387 53459750 . - . gene_id "intron_retention.84"; transcript_id "intron_retention.84"; gene_name "ENSG00000167778.4"; flanks "53459750-,53458388^"; structure "0,1^2-"; splice_chain ",53459486^53459058-"; psi_Aligned.out.sorted "0.430610"; chr12 undefined intron_retention 53468432 53469003 . - . gene_id "intron_retention.85"; transcript_id "intron_retention.85"; gene_name "ENSG00000167778.4"; flanks "53469003-,53468433^"; structure "0,1^2-"; splice_chain ",53468879^53468568-"; psi_Aligned.out.sorted "0.334234"; chr12 undefined intron_retention 56558086 56558515 . - . gene_id "intron_retention.86"; transcript_id "intron_retention.86"; gene_name "ENSG00000139613.7"; flanks "56558515-,56558087^"; structure "0,1^2-"; splice_chain ",56558432^56558152-"; psi_Aligned.out.sorted "0.374528"; chr12 undefined intron_retention 56572187 56572631 . - . gene_id "intron_retention.87"; transcript_id "intron_retention.87"; gene_name "ENSG00000139613.7"; flanks "56572631-,56572188^"; structure "0,1^2-"; splice_chain ",56572594^56572318-"; psi_Aligned.out.sorted "0.629421"; chr12 undefined intron_retention 102874096 102874378 . - . gene_id "intron_retention.88"; transcript_id "intron_retention.88"; gene_name "ENSG00000017427.11"; flanks "102874378-,102874097^"; structure "0,1^2-"; splice_chain ",102874365^102874178-"; psi_Aligned.out.sorted "0.741118"; chr12 undefined intron_retention 120220321 120221855 . - . gene_id "intron_retention.89"; transcript_id "intron_retention.89"; gene_name "ENSG00000122966.9"; flanks "120221855-,120220322^"; structure "0,1^2-"; splice_chain ",120221712^120220441-"; psi_Aligned.out.sorted "0.900706"; chr13 undefined intron_retention 21141808 21142136 . + . gene_id "intron_retention.90"; transcript_id "intron_retention.90"; gene_name "ENSG00000032742.13"; flanks "21141809-,21142136^"; structure "0,1^2-"; splice_chain ",21141924^21142024-"; psi_Aligned.out.sorted "0.757878"; chr13 undefined intron_retention 103518016 103518731 . + . gene_id "intron_retention.91"; transcript_id "intron_retention.91"; gene_name "ENSG00000134899.13"; flanks "103518017-,103518731^"; structure "0,1^2-"; splice_chain ",103518261^103518612-"; psi_Aligned.out.sorted "0.542140"; chr14 undefined intron_retention 24563261 24564054 . + . gene_id "intron_retention.92"; transcript_id "intron_retention.92"; gene_name "ENSG00000100889.7"; flanks "24563262-,24564054^"; structure "0,1^2-"; splice_chain ",24563463^24563975-"; psi_Aligned.out.sorted "0.907353"; chr14 undefined intron_retention 24563261 24564054 . + . gene_id "intron_retention.93"; transcript_id "intron_retention.93"; gene_name "ENSG00000100889.7"; flanks "24563262-,24564054^"; structure "0,1^2-"; splice_chain ",24563643^24563975-"; psi_Aligned.out.sorted "0.497416"; chr14 undefined intron_retention 50246312 50246524 . + . gene_id "intron_retention.94"; transcript_id "intron_retention.94"; gene_name "ENSG00000165516.6"; flanks "50246313-,50246524^"; structure "0,1^2-"; splice_chain ",50246393^50246466-"; psi_Aligned.out.sorted "0.867166"; chr14 undefined intron_retention 77934932 77935328 . + . gene_id "intron_retention.95"; transcript_id "intron_retention.95"; gene_name "ENSG00000100591.3"; flanks "77934933-,77935328^"; structure "0,1^2-"; splice_chain ",77935032^77935315-"; psi_Aligned.out.sorted "0.300165"; chr14 undefined intron_retention 77935314 77935590 . + . gene_id "intron_retention.96"; transcript_id "intron_retention.96"; gene_name "ENSG00000100591.3"; flanks "77935315-,77935590^"; structure "0,1^2-"; splice_chain ",77935328^77935420-"; psi_Aligned.out.sorted "0.799305"; chr14 undefined intron_retention 24684757 24685003 . - . gene_id "intron_retention.97"; transcript_id "intron_retention.97"; gene_name "ENSG00000260669.2"; flanks "24685003-,24684758^"; structure "0,1^2-"; splice_chain ",24684943^24684868-"; psi_Aligned.out.sorted "0.805058"; chr14 undefined intron_retention 104200088 104201000 . - . gene_id "intron_retention.98"; transcript_id "intron_retention.98"; gene_name "ENSG00000088808.12"; flanks "104201000-,104200089^"; structure "0,1^2-"; splice_chain ",104200704^104200259-"; psi_Aligned.out.sorted "0.942692"; chr14 undefined intron_retention 104200088 104201416 . - . gene_id "intron_retention.99"; transcript_id "intron_retention.99"; gene_name "ENSG00000088808.12"; flanks "104201416-,104200089^"; structure "0,1^2-"; splice_chain ",104201337^104201000-"; psi_Aligned.out.sorted "0.982830"; chr15 undefined intron_retention 33022890 33026870 . + . gene_id "intron_retention.101"; transcript_id "intron_retention.101"; gene_name "ENSG00000166923.6"; flanks "33022891-,33026870^"; structure "0,1^2-"; splice_chain ",33022995^33023117-"; psi_Aligned.out.sorted "0.302638"; chr15 undefined intron_retention 33022890 33026870 . + . gene_id "intron_retention.102"; transcript_id "intron_retention.102"; gene_name "ENSG00000166923.6"; flanks "33022891-,33026870^"; structure "0,1^2-"; splice_chain ",33023005^33023129-"; psi_Aligned.out.sorted "0.490395"; chr15 undefined intron_retention 40568127 40569687 . + . gene_id "intron_retention.103"; transcript_id "intron_retention.103"; gene_name "ENSG00000137843.7"; flanks "40568128-,40569687^"; structure "0,1^2-"; splice_chain ",40568306^40569317-"; psi_Aligned.out.sorted "0.916871"; chr15 undefined intron_retention 41222044 41223088 . + . gene_id "intron_retention.104"; transcript_id "intron_retention.104"; gene_name "ENSG00000128917.5"; flanks "41222045-,41223088^"; structure "0,1^2-"; splice_chain ",41222314^41222823-"; psi_Aligned.out.sorted "0.311021"; chr15 undefined intron_retention 64444441 64444941 . + . gene_id "intron_retention.105"; transcript_id "intron_retention.105"; gene_name "ENSG00000157734.9"; flanks "64444442-,64444941^"; structure "0,1^2-"; splice_chain ",64444525^64444837-"; psi_Aligned.out.sorted "0.872260"; chr15 undefined intron_retention 64444441 64445538 . + . gene_id "intron_retention.106"; transcript_id "intron_retention.106"; gene_name "ENSG00000157734.9"; flanks "64444442-,64445538^"; structure "0,1^2-"; splice_chain ",64444941^64445444-"; psi_Aligned.out.sorted "0.272798"; chr15 undefined intron_retention 64444836 64445883 . + . gene_id "intron_retention.107"; transcript_id "intron_retention.107"; gene_name "ENSG00000157734.9"; flanks "64444837-,64445883^"; structure "0,1^2-"; splice_chain ",64445538^64445851-"; psi_Aligned.out.sorted "0.303884"; chr15 undefined intron_retention 64445443 64445883 . + . gene_id "intron_retention.108"; transcript_id "intron_retention.108"; gene_name "ENSG00000157734.9"; flanks "64445444-,64445883^"; structure "0,1^2-"; splice_chain ",64445585^64445851-"; psi_Aligned.out.sorted "0.824619"; chr15 undefined intron_retention 64444836 64446201 . + . gene_id "intron_retention.110"; transcript_id "intron_retention.110"; gene_name "ENSG00000157734.9"; flanks "64444837-,64446201^"; structure "0,1^2-"; splice_chain ",64445883^64446134-"; psi_Aligned.out.sorted "0.315027"; chr15 undefined intron_retention 64444836 64446951 . + . gene_id "intron_retention.111"; transcript_id "intron_retention.111"; gene_name "ENSG00000157734.9"; flanks "64444837-,64446951^"; structure "0,1^2-"; splice_chain ",64446201^64446586-"; psi_Aligned.out.sorted "0.680233"; chr15 undefined intron_retention 64444836 64449680 . + . gene_id "intron_retention.112"; transcript_id "intron_retention.112"; gene_name "ENSG00000157734.9"; flanks "64444837-,64449680^"; structure "0,1^2-"; splice_chain ",64446951^64447590-"; psi_Aligned.out.sorted "0.770202"; chr15 undefined intron_retention 64444836 64449680 . + . gene_id "intron_retention.113"; transcript_id "intron_retention.113"; gene_name "ENSG00000157734.9"; flanks "64444837-,64449680^"; structure "0,1^2-"; splice_chain ",64447102^64447306-"; psi_Aligned.out.sorted "0.652991"; chr15 undefined intron_retention 78080230 78080917 . + . gene_id "intron_retention.114"; transcript_id "intron_retention.114"; gene_name "ENSG00000259213.1"; flanks "78080231-,78080917^"; structure "0,1^2-"; splice_chain ",78080487^78080723-"; psi_Aligned.out.sorted "0.734981"; chr15 undefined intron_retention 89878283 89879392 . + . gene_id "intron_retention.115"; transcript_id "intron_retention.115"; gene_name "ENSG00000261441.1"; flanks "89878284-,89879392^"; structure "0,1^2-"; splice_chain ",89878600^89878880-"; psi_Aligned.out.sorted "0.778231"; chr15 undefined intron_retention 97326618 97327489 . + . gene_id "intron_retention.116"; transcript_id "intron_retention.116"; gene_name "ENSG00000185594.4"; flanks "97326619-,97327489^"; structure "0,1^2-"; splice_chain ",97326819^97327383-"; psi_Aligned.out.sorted "0.824180"; chr15 undefined intron_retention 97326618 97327489 . + . gene_id "intron_retention.117"; transcript_id "intron_retention.117"; gene_name "ENSG00000185594.4"; flanks "97326619-,97327489^"; structure "0,1^2-"; splice_chain ",97326974^97327383-"; psi_Aligned.out.sorted "0.609122"; chr15 undefined intron_retention 97326618 97327489 . + . gene_id "intron_retention.118"; transcript_id "intron_retention.118"; gene_name "ENSG00000185594.4"; flanks "97326619-,97327489^"; structure "0,1^2-"; splice_chain ",97327060^97327383-"; psi_Aligned.out.sorted "0.751286"; chr15 undefined intron_retention 44876011 44876756 . - . gene_id "intron_retention.119"; transcript_id "intron_retention.119"; gene_name "ENSG00000104133.10"; flanks "44876756-,44876012^"; structure "0,1^2-"; splice_chain ",44876363^44876133-"; psi_Aligned.out.sorted "0.722971"; chr15 undefined intron_retention 44890462 44891034 . - . gene_id "intron_retention.120"; transcript_id "intron_retention.120"; gene_name "ENSG00000104133.10"; flanks "44891034-,44890463^"; structure "0,1^2-"; splice_chain ",44890829^44890571-"; psi_Aligned.out.sorted "0.538772"; chr15 undefined intron_retention 83330919 83331674 . - . gene_id "intron_retention.121"; transcript_id "intron_retention.121"; gene_name "ENSG00000103723.8"; flanks "83331674-,83330920^"; structure "0,1^2-"; splice_chain ",83331446^83331004-"; psi_Aligned.out.sorted "0.519782"; chr15 undefined intron_retention 83357487 83357984 . - . gene_id "intron_retention.122"; transcript_id "intron_retention.122"; gene_name "ENSG00000103723.8"; flanks "83357984-,83357488^"; structure "0,1^2-"; splice_chain ",83357910^83357583-"; psi_Aligned.out.sorted "0.437653"; chr15 undefined intron_retention 84873177 84873443 . - . gene_id "intron_retention.123"; transcript_id "intron_retention.123"; gene_name "ENSG00000225151.6"; flanks "84873443-,84873178^"; structure "0,1^2-"; splice_chain ",84873348^84873268-"; psi_Aligned.out.sorted "0.735142"; chr15 undefined intron_retention 84873177 84873443 . - . gene_id "intron_retention.124"; transcript_id "intron_retention.124"; gene_name "ENSG00000225151.6"; flanks "84873443-,84873178^"; structure "0,1^2-"; splice_chain ",84873352^84873268-"; psi_Aligned.out.sorted "0.485723"; chr16 undefined intron_retention 3115297 3115688 . + . gene_id "intron_retention.126"; transcript_id "intron_retention.126"; gene_name "ENSG00000008517.12"; flanks "3115298-,3115688^"; structure "0,1^2-"; splice_chain ",3115495^3115622-"; psi_Aligned.out.sorted "0.979288"; chr16 undefined intron_retention 3115297 3115656 . + . gene_id "intron_retention.127"; transcript_id "intron_retention.127"; gene_name "ENSG00000008517.12"; flanks "3115298-,3115656^"; structure "0,1^2-"; splice_chain ",3115495^3115643-"; psi_Aligned.out.sorted "0.954457"; chr16 undefined intron_retention 3115297 3115827 . + . gene_id "intron_retention.128"; transcript_id "intron_retention.128"; gene_name "ENSG00000008517.12"; flanks "3115298-,3115827^"; structure "0,1^2-"; splice_chain ",3115495^3115782-"; psi_Aligned.out.sorted "0.797225"; chr16 undefined intron_retention 3115297 3115827 . + . gene_id "intron_retention.129"; transcript_id "intron_retention.129"; gene_name "ENSG00000008517.12"; flanks "3115298-,3115827^"; structure "0,1^2-"; splice_chain ",3115495^3115785-"; psi_Aligned.out.sorted "0.861764"; chr16 undefined intron_retention 3115642 3115827 . + . gene_id "intron_retention.130"; transcript_id "intron_retention.130"; gene_name "ENSG00000008517.12"; flanks "3115643-,3115827^"; structure "0,1^2-"; splice_chain ",3115656^3115785-"; psi_Aligned.out.sorted "0.610246"; chr16 undefined intron_retention 3115297 3115827 . + . gene_id "intron_retention.131"; transcript_id "intron_retention.131"; gene_name "ENSG00000008517.12"; flanks "3115298-,3115827^"; structure "0,1^2-"; splice_chain ",3115688^3115782-"; psi_Aligned.out.sorted "0.966707"; chr16 undefined intron_retention 3115297 3115827 . + . gene_id "intron_retention.132"; transcript_id "intron_retention.132"; gene_name "ENSG00000008517.12"; flanks "3115298-,3115827^"; structure "0,1^2-"; splice_chain ",3115688^3115785-"; psi_Aligned.out.sorted "0.486765"; chr16 undefined intron_retention 3115297 3115827 . + . gene_id "intron_retention.133"; transcript_id "intron_retention.133"; gene_name "ENSG00000008517.12"; flanks "3115298-,3115827^"; structure "0,1^2-"; splice_chain ",3115711^3115782-"; psi_Aligned.out.sorted "0.898749"; chr16 undefined intron_retention 3115297 3115827 . + . gene_id "intron_retention.134"; transcript_id "intron_retention.134"; gene_name "ENSG00000008517.12"; flanks "3115298-,3115827^"; structure "0,1^2-"; splice_chain ",3115711^3115785-"; psi_Aligned.out.sorted "0.842800"; chr16 undefined intron_retention 3117377 3117614 . + . gene_id "intron_retention.135"; transcript_id "intron_retention.135"; gene_name "ENSG00000008517.12"; flanks "3117378-,3117614^"; structure "0,1^2-"; splice_chain ",3117416^3117555-"; psi_Aligned.out.sorted "0.502272"; chr16 undefined intron_retention 3118990 3119668 . + . gene_id "intron_retention.136"; transcript_id "intron_retention.136"; gene_name "ENSG00000008517.12"; flanks "3118991-,3119668^"; structure "0,1^2-"; splice_chain ",3119110^3119282-"; psi_Aligned.out.sorted "0.947048"; chr16 undefined intron_retention 89789544 89790117 . + . gene_id "intron_retention.138"; transcript_id "intron_retention.138"; gene_name "ENSG00000158805.7"; flanks "89789545-,89790117^"; structure "0,1^2-"; splice_chain ",89789591^89789668-"; psi_Aligned.out.sorted "0.489352"; chr16 undefined intron_retention 89789544 89790117 . + . gene_id "intron_retention.139"; transcript_id "intron_retention.139"; gene_name "ENSG00000158805.7"; flanks "89789545-,89790117^"; structure "0,1^2-"; splice_chain ",89789591^89789687-"; psi_Aligned.out.sorted "0.935304"; chr16 undefined intron_retention 89799709 89799965 . + . gene_id "intron_retention.140"; transcript_id "intron_retention.140"; gene_name "ENSG00000158805.7"; flanks "89799710-,89799965^"; structure "0,1^2-"; splice_chain ",89799820^89799890-"; psi_Aligned.out.sorted "0.263060"; chr16 undefined intron_retention 4404542 4405373 . - . gene_id "intron_retention.141"; transcript_id "intron_retention.141"; gene_name "ENSG00000262246.1"; flanks "4405373-,4404543^"; structure "0,1^2-"; splice_chain ",4405287^4405164-"; psi_Aligned.out.sorted "0.422624"; chr16 undefined intron_retention 4411749 4412161 . - . gene_id "intron_retention.142"; transcript_id "intron_retention.142"; gene_name "ENSG00000262246.1"; flanks "4412161-,4411750^"; structure "0,1^2-"; splice_chain ",4411986^4411804-"; psi_Aligned.out.sorted "0.872786"; chr16 undefined intron_retention 15153878 15155762 . - . gene_id "intron_retention.143"; transcript_id "intron_retention.143"; gene_name "ENSG00000085721.8"; flanks "15155762-,15153879^"; structure "0,1^2-"; splice_chain ",15155646^15154030-"; psi_Aligned.out.sorted "0.406953"; chr16 undefined intron_retention 23474862 23479021 . - . gene_id "intron_retention.144"; transcript_id "intron_retention.144"; gene_name "ENSG00000103365.11"; flanks "23479021-,23474863^"; structure "0,1^2-"; splice_chain ",23478753^23478099-"; psi_Aligned.out.sorted "0.391590"; chr16 undefined intron_retention 23474862 23479021 . - . gene_id "intron_retention.145"; transcript_id "intron_retention.145"; gene_name "ENSG00000103365.11"; flanks "23479021-,23474863^"; structure "0,1^2-"; splice_chain ",23478310^23478151-"; psi_Aligned.out.sorted "0.355836"; chr16 undefined intron_retention 30004779 30005129 . - . gene_id "intron_retention.146"; transcript_id "intron_retention.146"; gene_name "ENSG00000149929.11"; flanks "30005129-,30004780^"; structure "0,1^2-"; splice_chain ",30004961^30004878-"; psi_Aligned.out.sorted "0.399724"; chr16 undefined intron_retention 30006423 30006784 . - . gene_id "intron_retention.147"; transcript_id "intron_retention.147"; gene_name "ENSG00000149929.11"; flanks "30006784-,30006424^"; structure "0,1^2-"; splice_chain ",30006664^30006538-"; psi_Aligned.out.sorted "0.390016"; chr16 undefined intron_retention 30006423 30007757 . - . gene_id "intron_retention.148"; transcript_id "intron_retention.148"; gene_name "ENSG00000149929.11"; flanks "30007757-,30006424^"; structure "0,1^2-"; splice_chain ",30006862^30006784-"; psi_Aligned.out.sorted "0.244241"; chr16 undefined intron_retention 57505862 57507648 . - . gene_id "intron_retention.149"; transcript_id "intron_retention.149"; gene_name "ENSG00000125170.6"; flanks "57507648-,57505863^"; structure "0,1^2-"; splice_chain ",57507525^57507407-"; psi_Aligned.out.sorted "0.781649"; chr16 undefined intron_retention 67218588 67218960 . - . gene_id "intron_retention.150"; transcript_id "intron_retention.150"; gene_name "ENSG00000179044.11"; flanks "67218960-,67218589^"; structure "0,1^2-"; splice_chain ",67218805^67218713-"; psi_Aligned.out.sorted "0.725179"; chr16 undefined intron_retention 67969322 67969600 . - . gene_id "intron_retention.151"; transcript_id "intron_retention.151"; gene_name "ENSG00000205220.7"; flanks "67969600-,67969323^"; structure "0,1^2-"; splice_chain ",67969485^67969381-"; psi_Aligned.out.sorted "0.266413"; chr16 undefined intron_retention 67969865 67970215 . - . gene_id "intron_retention.152"; transcript_id "intron_retention.152"; gene_name "ENSG00000205220.7"; flanks "67970215-,67969866^"; structure "0,1^2-"; splice_chain ",67970118^67970006-"; psi_Aligned.out.sorted "0.372462"; chr16 undefined intron_retention 67970300 67970990 . - . gene_id "intron_retention.153"; transcript_id "intron_retention.153"; gene_name "ENSG00000205220.7"; flanks "67970990-,67970301^"; structure "0,1^2-"; splice_chain ",67970597^67970388-"; psi_Aligned.out.sorted "0.386621"; chr16 undefined intron_retention 70253476 70253894 . - . gene_id "intron_retention.154"; transcript_id "intron_retention.154"; gene_name "ENSG00000261556.4"; flanks "70253894-,70253477^"; structure "0,1^2-"; splice_chain ",70253815^70253698-"; psi_Aligned.out.sorted "0.764872"; chr16 undefined intron_retention 75589701 75590184 . - . gene_id "intron_retention.155"; transcript_id "intron_retention.155"; gene_name "ENSG00000205084.6"; flanks "75590184-,75589702^"; structure "0,1^2-"; splice_chain ",75589969^75589871-"; psi_Aligned.out.sorted "0.821273"; chr17 undefined intron_retention 1939263 1939980 . + . gene_id "intron_retention.156"; transcript_id "intron_retention.156"; gene_name "ENSG00000108963.13"; flanks "1939264-,1939980^"; structure "0,1^2-"; splice_chain ",1939385^1939723-"; psi_Aligned.out.sorted "0.880141"; chr17 undefined intron_retention 1939263 1939980 . + . gene_id "intron_retention.157"; transcript_id "intron_retention.157"; gene_name "ENSG00000108963.13"; flanks "1939264-,1939980^"; structure "0,1^2-"; splice_chain ",1939385^1939823-"; psi_Aligned.out.sorted "0.668564"; chr17 undefined intron_retention 1944396 1944915 . + . gene_id "intron_retention.158"; transcript_id "intron_retention.158"; gene_name "ENSG00000108963.13"; flanks "1944397-,1944915^"; structure "0,1^2-"; splice_chain ",1944475^1944775-"; psi_Aligned.out.sorted "0.239359"; chr17 undefined intron_retention 1945061 1946264 . + . gene_id "intron_retention.159"; transcript_id "intron_retention.159"; gene_name "ENSG00000108963.13"; flanks "1945062-,1946264^"; structure "0,1^2-"; splice_chain ",1945169^1945899-"; psi_Aligned.out.sorted "0.233974"; chr17 undefined intron_retention 1945061 1946724 . + . gene_id "intron_retention.160"; transcript_id "intron_retention.160"; gene_name "ENSG00000108963.13"; flanks "1945062-,1946724^"; structure "0,1^2-"; splice_chain ",1945169^1946270-"; psi_Aligned.out.sorted "0.608279"; chr17 undefined intron_retention 1945061 1946264 . + . gene_id "intron_retention.161"; transcript_id "intron_retention.161"; gene_name "ENSG00000108963.13"; flanks "1945062-,1946264^"; structure "0,1^2-"; splice_chain ",1945525^1945899-"; psi_Aligned.out.sorted "0.827016"; chr17 undefined intron_retention 26554331 26555091 . + . gene_id "intron_retention.165"; transcript_id "intron_retention.165"; gene_name "ENSG00000237575.4"; flanks "26554332-,26555091^"; structure "0,1^2-"; splice_chain ",26554519^26554634-"; psi_Aligned.out.sorted "0.783255"; chr17 undefined intron_retention 37821968 37822808 . + . gene_id "intron_retention.166"; transcript_id "intron_retention.166"; gene_name "ENSG00000173991.5"; flanks "37821969-,37822808^"; structure "0,1^2-"; splice_chain ",37822032^37822105-"; psi_Aligned.out.sorted "0.774021"; chr17 undefined intron_retention 647653 651272 . - . gene_id "intron_retention.173"; transcript_id "intron_retention.173"; gene_name "ENSG00000179409.6"; flanks "651272-,647654^"; structure "0,1^2-"; splice_chain ",650785^650522-"; psi_Aligned.out.sorted "0.890420"; chr17 undefined intron_retention 5487006 5487829 . - . gene_id "intron_retention.174"; transcript_id "intron_retention.174"; gene_name "ENSG00000091592.11"; flanks "5487829-,5487007^"; structure "0,1^2-"; splice_chain ",5487613^5487423-"; psi_Aligned.out.sorted "0.644310"; chr17 undefined intron_retention 8647844 8648154 . - . gene_id "intron_retention.175"; transcript_id "intron_retention.175"; gene_name "ENSG00000161973.6"; flanks "8648154-,8647845^"; structure "0,1^2-"; splice_chain ",8648147^8648038-"; psi_Aligned.out.sorted "0.883746"; chr17 undefined intron_retention 15531273 15532512 . - . gene_id "intron_retention.176"; transcript_id "intron_retention.176"; gene_name "ENSG00000221926.7"; flanks "15532512-,15531274^"; structure "0,1^2-"; splice_chain ",15532188^15531375-"; psi_Aligned.out.sorted "0.796959"; chr17 undefined intron_retention 41738433 41739322 . - . gene_id "intron_retention.177"; transcript_id "intron_retention.177"; gene_name "ENSG00000005102.8"; flanks "41739322-,41738434^"; structure "0,1^2-"; splice_chain ",41739239^41738761-"; psi_Aligned.out.sorted "0.844891"; chr17 undefined intron_retention 42340003 42340302 . - . gene_id "intron_retention.178"; transcript_id "intron_retention.178"; gene_name "ENSG00000004939.9"; flanks "42340302-,42340004^"; structure "0,1^2-"; splice_chain ",42340220^42340094-"; psi_Aligned.out.sorted "0.931082"; chr17 undefined intron_retention 56080720 56082402 . - . gene_id "intron_retention.179"; transcript_id "intron_retention.179"; gene_name "ENSG00000136450.8"; flanks "56082402-,56080721^"; structure "0,1^2-"; splice_chain ",56082284^56081079-"; psi_Aligned.out.sorted "0.834310"; chr17 undefined intron_retention 56080720 56082402 . - . gene_id "intron_retention.180"; transcript_id "intron_retention.180"; gene_name "ENSG00000136450.8"; flanks "56082402-,56080721^"; structure "0,1^2-"; splice_chain ",56082284^56081362-"; psi_Aligned.out.sorted "0.890962"; chr17 undefined intron_retention 56080720 56082961 . - . gene_id "intron_retention.181"; transcript_id "intron_retention.181"; gene_name "ENSG00000136450.8"; flanks "56082961-,56080721^"; structure "0,1^2-"; splice_chain ",56082759^56082402-"; psi_Aligned.out.sorted "0.879047"; chr17 undefined intron_retention 56080720 56082961 . - . gene_id "intron_retention.182"; transcript_id "intron_retention.182"; gene_name "ENSG00000136450.8"; flanks "56082961-,56080721^"; structure "0,1^2-"; splice_chain ",56082775^56082402-"; psi_Aligned.out.sorted "0.325613"; chr17 undefined intron_retention 76987798 76990002 . - . gene_id "intron_retention.185"; transcript_id "intron_retention.185"; gene_name "ENSG00000171302.12"; flanks "76990002-,76987799^"; structure "0,1^2-"; splice_chain ",76988492^76988222-"; psi_Aligned.out.sorted "0.476921"; chr17 undefined intron_retention 76993073 76993726 . - . gene_id "intron_retention.186"; transcript_id "intron_retention.186"; gene_name "ENSG00000171302.12"; flanks "76993726-,76993074^"; structure "0,1^2-"; splice_chain ",76993573^76993411-"; psi_Aligned.out.sorted "0.606022"; chr17 undefined intron_retention 76993073 76994045 . - . gene_id "intron_retention.187"; transcript_id "intron_retention.187"; gene_name "ENSG00000171302.12"; flanks "76994045-,76993074^"; structure "0,1^2-"; splice_chain ",76993922^76993726-"; psi_Aligned.out.sorted "0.286591"; chr17 undefined intron_retention 79358745 79359160 . - . gene_id "intron_retention.188"; transcript_id "intron_retention.188"; gene_name "ENSG00000262223.2"; flanks "79359160-,79358746^"; structure "0,1^2-"; splice_chain ",79358929^79358832-"; psi_Aligned.out.sorted "0.694436"; chr17 undefined intron_retention 79476996 79477859 . - . gene_id "intron_retention.189"; transcript_id "intron_retention.189"; gene_name "ENSG00000184009.5"; flanks "79477859-,79476997^"; structure "0,1^2-"; splice_chain ",79477505^79477355-"; psi_Aligned.out.sorted "0.955914"; chr17 undefined intron_retention 79477952 79478652 . - . gene_id "intron_retention.190"; transcript_id "intron_retention.190"; gene_name "ENSG00000184009.5"; flanks "79478652-,79477953^"; structure "0,1^2-"; splice_chain ",79478214^79478134-"; psi_Aligned.out.sorted "0.253195"; chr17 undefined intron_retention 79477952 79478829 . - . gene_id "intron_retention.191"; transcript_id "intron_retention.191"; gene_name "ENSG00000184009.5"; flanks "79478829-,79477953^"; structure "0,1^2-"; splice_chain ",79478789^79478652-"; psi_Aligned.out.sorted "0.655010"; chr17 undefined intron_retention 79890259 79891252 . - . gene_id "intron_retention.192"; transcript_id "intron_retention.192"; gene_name "ENSG00000183010.12"; flanks "79891252-,79890260^"; structure "0,1^2-"; splice_chain ",79891183^79890839-"; psi_Aligned.out.sorted "0.873906"; chr17 undefined intron_retention 79916810 79917442 . - . gene_id "intron_retention.193"; transcript_id "intron_retention.193"; gene_name "ENSG00000185269.7"; flanks "79917442-,79916811^"; structure "0,1^2-"; splice_chain ",79917347^79916871-"; psi_Aligned.out.sorted "0.481525"; chr17 undefined intron_retention 79994022 79994324 . - . gene_id "intron_retention.194"; transcript_id "intron_retention.194"; gene_name "ENSG00000169738.3"; flanks "79994324-,79994023^"; structure "0,1^2-"; splice_chain ",79994260^79994184-"; psi_Aligned.out.sorted "0.252288"; chr17 undefined intron_retention 79994022 79994324 . - . gene_id "intron_retention.195"; transcript_id "intron_retention.195"; gene_name "ENSG00000169738.3"; flanks "79994324-,79994023^"; structure "0,1^2-"; splice_chain ",79994290^79994184-"; psi_Aligned.out.sorted "0.825223"; chr17 undefined intron_retention 79994066 79994324 . - . gene_id "intron_retention.196"; transcript_id "intron_retention.196"; gene_name "ENSG00000169738.3"; flanks "79994324-,79994067^"; structure "0,1^2-"; splice_chain ",79994260^79994198-"; psi_Aligned.out.sorted "0.809981"; chr17 undefined intron_retention 79994066 79994519 . - . gene_id "intron_retention.198"; transcript_id "intron_retention.198"; gene_name "ENSG00000169738.3"; flanks "79994519-,79994067^"; structure "0,1^2-"; splice_chain ",79994420^79994324-"; psi_Aligned.out.sorted "0.298716"; chr18 undefined intron_retention 14968999 14969756 . - . gene_id "intron_retention.200"; transcript_id "intron_retention.200"; gene_name "ENSG00000264301.1"; flanks "14969756-,14969000^"; structure "0,1^2-"; splice_chain ",14969675^14969571-"; psi_Aligned.out.sorted "0.260476"; chr19 undefined intron_retention 10394156 10394462 . + . gene_id "intron_retention.202"; transcript_id "intron_retention.202"; gene_name "ENSG00000090339.4"; flanks "10394157-,10394462^"; structure "0,1^2-"; splice_chain ",10394170^10394234-"; psi_Aligned.out.sorted "0.574039"; chr19 undefined intron_retention 11474388 11474888 . + . gene_id "intron_retention.203"; transcript_id "intron_retention.203"; gene_name "ENSG00000105520.6"; flanks "11474389-,11474888^"; structure "0,1^2-"; splice_chain ",11474495^11474837-"; psi_Aligned.out.sorted "0.956060"; chr19 undefined intron_retention 11474388 11474888 . + . gene_id "intron_retention.204"; transcript_id "intron_retention.204"; gene_name "ENSG00000105520.6"; flanks "11474389-,11474888^"; structure "0,1^2-"; splice_chain ",11474511^11474837-"; psi_Aligned.out.sorted "0.966706"; chr19 undefined intron_retention 12917393 12917893 . + . gene_id "intron_retention.205"; transcript_id "intron_retention.205"; gene_name "ENSG00000104889.4"; flanks "12917394-,12917893^"; structure "0,1^2-"; splice_chain ",12917614^12917822-"; psi_Aligned.out.sorted "0.452511"; chr19 undefined intron_retention 12918019 12918320 . + . gene_id "intron_retention.206"; transcript_id "intron_retention.206"; gene_name "ENSG00000104889.4"; flanks "12918020-,12918320^"; structure "0,1^2-"; splice_chain ",12918143^12918233-"; psi_Aligned.out.sorted "0.269116"; chr19 undefined intron_retention 17449762 17450075 . + . gene_id "intron_retention.207"; transcript_id "intron_retention.207"; gene_name "ENSG00000130299.12"; flanks "17449763-,17450075^"; structure "0,1^2-"; splice_chain ",17449835^17449932-"; psi_Aligned.out.sorted "0.423401"; chr19 undefined intron_retention 17597371 17598144 . + . gene_id "intron_retention.208"; transcript_id "intron_retention.208"; gene_name "ENSG00000130304.12"; flanks "17597372-,17598144^"; structure "0,1^2-"; splice_chain ",17597766^17597909-"; psi_Aligned.out.sorted "0.713373"; chr19 undefined intron_retention 17597371 17598144 . + . gene_id "intron_retention.209"; transcript_id "intron_retention.209"; gene_name "ENSG00000130304.12"; flanks "17597372-,17598144^"; structure "0,1^2-"; splice_chain ",17597766^17597983-"; psi_Aligned.out.sorted "0.252657"; chr19 undefined intron_retention 35642156 35642376 . + . gene_id "intron_retention.210"; transcript_id "intron_retention.210"; gene_name "ENSG00000221946.3"; flanks "35642157-,35642376^"; structure "0,1^2-"; splice_chain ",35642231^35642343-"; psi_Aligned.out.sorted "0.378222"; chr19 undefined intron_retention 40485976 40486361 . + . gene_id "intron_retention.211"; transcript_id "intron_retention.211"; gene_name "ENSG00000013275.3"; flanks "40485977-,40486361^"; structure "0,1^2-"; splice_chain ",40486053^40486193-"; psi_Aligned.out.sorted "0.435438"; chr19 undefined intron_retention 40485976 40486624 . + . gene_id "intron_retention.212"; transcript_id "intron_retention.212"; gene_name "ENSG00000013275.3"; flanks "40485977-,40486624^"; structure "0,1^2-"; splice_chain ",40486361^40486569-"; psi_Aligned.out.sorted "0.391157"; chr19 undefined intron_retention 45261502 45262098 . + . gene_id "intron_retention.213"; transcript_id "intron_retention.213"; gene_name "ENSG00000069399.8"; flanks "45261503-,45262098^"; structure "0,1^2-"; splice_chain ",45261670^45261981-"; psi_Aligned.out.sorted "0.642048"; chr19 undefined intron_retention 45261502 45262098 . + . gene_id "intron_retention.214"; transcript_id "intron_retention.214"; gene_name "ENSG00000069399.8"; flanks "45261503-,45262098^"; structure "0,1^2-"; splice_chain ",45261730^45261981-"; psi_Aligned.out.sorted "0.675238"; chr19 undefined intron_retention 50303224 50303407 . + . gene_id "intron_retention.215"; transcript_id "intron_retention.215"; gene_name "ENSG00000196961.8"; flanks "50303225-,50303407^"; structure "0,1^2-"; splice_chain ",50303274^50303354-"; psi_Aligned.out.sorted "0.883584"; chr19 undefined intron_retention 50308709 50309034 . + . gene_id "intron_retention.216"; transcript_id "intron_retention.216"; gene_name "ENSG00000196961.8"; flanks "50308710-,50309034^"; structure "0,1^2-"; splice_chain ",50308833^50308918-"; psi_Aligned.out.sorted "0.450243"; chr19 undefined intron_retention 50308709 50309034 . + . gene_id "intron_retention.217"; transcript_id "intron_retention.217"; gene_name "ENSG00000196961.8"; flanks "50308710-,50309034^"; structure "0,1^2-"; splice_chain ",50308833^50308982-"; psi_Aligned.out.sorted "0.848388"; chr19 undefined intron_retention 50308709 50309198 . + . gene_id "intron_retention.218"; transcript_id "intron_retention.218"; gene_name "ENSG00000196961.8"; flanks "50308710-,50309198^"; structure "0,1^2-"; splice_chain ",50309034^50309129-"; psi_Aligned.out.sorted "0.393304"; chr19 undefined intron_retention 50308709 50309510 . + . gene_id "intron_retention.219"; transcript_id "intron_retention.219"; gene_name "ENSG00000196961.8"; flanks "50308710-,50309510^"; structure "0,1^2-"; splice_chain ",50309198^50309376-"; psi_Aligned.out.sorted "0.479127"; chr19 undefined intron_retention 50308709 50310369 . + . gene_id "intron_retention.220"; transcript_id "intron_retention.220"; gene_name "ENSG00000196961.8"; flanks "50308710-,50310369^"; structure "0,1^2-"; splice_chain ",50309510^50309938-"; psi_Aligned.out.sorted "0.484742"; chr19 undefined intron_retention 58965594 58969200 . + . gene_id "intron_retention.221"; transcript_id "intron_retention.221"; gene_name "ENSG00000249471.3"; flanks "58965595-,58969200^"; structure "0,1^2-"; splice_chain ",58965711^58966550-"; psi_Aligned.out.sorted "0.342679"; chr19 undefined intron_retention 6375158 6379069 . - . gene_id "intron_retention.223"; transcript_id "intron_retention.223"; gene_name "ENSG00000125650.4"; flanks "6379069-,6375159^"; structure "0,1^2-"; splice_chain ",6375713^6375627-"; psi_Aligned.out.sorted "0.472348"; chr19 undefined intron_retention 16653433 16655625 . - . gene_id "intron_retention.224"; transcript_id "intron_retention.224"; gene_name "ENSG00000269399.1"; flanks "16655625-,16653434^"; structure "0,1^2-"; splice_chain ",16655075^16654416-"; psi_Aligned.out.sorted "0.784752"; chr19 undefined intron_retention 41937222 41938313 . - . gene_id "intron_retention.228"; transcript_id "intron_retention.228"; gene_name "ENSG00000105341.14"; flanks "41938313-,41937223^"; structure "0,1^2-"; splice_chain ",41938220^41937793-"; psi_Aligned.out.sorted "0.920957"; chr19 undefined intron_retention 42734337 42735019 . - . gene_id "intron_retention.229"; transcript_id "intron_retention.229"; gene_name "ENSG00000105723.7"; flanks "42735019-,42734338^"; structure "0,1^2-"; splice_chain ",42734831^42734543-"; psi_Aligned.out.sorted "0.945215"; chr19 undefined intron_retention 49299403 49299759 . - . gene_id "intron_retention.230"; transcript_id "intron_retention.230"; gene_name "ENSG00000105552.10"; flanks "49299759-,49299404^"; structure "0,1^2-"; splice_chain ",49299685^49299586-"; psi_Aligned.out.sorted "0.920580"; chr19 undefined intron_retention 51532347 51532713 . - . gene_id "intron_retention.231"; transcript_id "intron_retention.231"; gene_name "ENSG00000186474.11"; flanks "51532713-,51532348^"; structure "0,1^2-"; splice_chain ",51532598^51532468-"; psi_Aligned.out.sorted "0.692599"; chr2 undefined intron_retention 9244163 9244710 . + . gene_id "intron_retention.232"; transcript_id "intron_retention.232"; gene_name "ENSG00000242136.1"; flanks "9244164-,9244710^"; structure "0,1^2-"; splice_chain ",9244289^9244565-"; psi_Aligned.out.sorted "0.654967"; chr2 undefined intron_retention 27729347 27729752 . + . gene_id "intron_retention.233"; transcript_id "intron_retention.233"; gene_name "ENSG00000084734.4"; flanks "27729348-,27729752^"; structure "0,1^2-"; splice_chain ",27729446^27729655-"; psi_Aligned.out.sorted "0.281050"; chr2 undefined intron_retention 27730101 27730644 . + . gene_id "intron_retention.234"; transcript_id "intron_retention.234"; gene_name "ENSG00000084734.4"; flanks "27730102-,27730644^"; structure "0,1^2-"; splice_chain ",27730178^27730548-"; psi_Aligned.out.sorted "0.182145"; chr2 undefined intron_retention 99225041 99226502 . + . gene_id "intron_retention.237"; transcript_id "intron_retention.237"; gene_name "ENSG00000115446.7"; flanks "99225042-,99226502^"; structure "0,1^2-"; splice_chain ",99225189^99226219-"; psi_Aligned.out.sorted "0.966230"; chr2 undefined intron_retention 99225041 99226502 . + . gene_id "intron_retention.238"; transcript_id "intron_retention.238"; gene_name "ENSG00000115446.7"; flanks "99225042-,99226502^"; structure "0,1^2-"; splice_chain ",99225474^99226106-"; psi_Aligned.out.sorted "0.658160"; chr2 undefined intron_retention 109111746 109113565 . + . gene_id "intron_retention.239"; transcript_id "intron_retention.239"; gene_name "ENSG00000135968.15"; flanks "109111747-,109113565^"; structure "0,1^2-"; splice_chain ",109111941^109113426-"; psi_Aligned.out.sorted "0.753312"; chr2 undefined intron_retention 219231746 219232241 . + . gene_id "intron_retention.240"; transcript_id "intron_retention.240"; gene_name "ENSG00000158428.3"; flanks "219231747-,219232241^"; structure "0,1^2-"; splice_chain ",219231823^219232153-"; psi_Aligned.out.sorted "0.381201"; chr2 undefined intron_retention 219458830 219461803 . + . gene_id "intron_retention.241"; transcript_id "intron_retention.241"; gene_name "ENSG00000144580.9"; flanks "219458831-,219461803^"; structure "0,1^2-"; splice_chain ",219461021^219461058-"; psi_Aligned.out.sorted "0.179097"; chr2 undefined intron_retention 220097800 220098155 . + . gene_id "intron_retention.242"; transcript_id "intron_retention.242"; gene_name "ENSG00000163516.9"; flanks "220097801-,220098155^"; structure "0,1^2-"; splice_chain ",220097913^220098008-"; psi_Aligned.out.sorted "0.311276"; chr2 undefined intron_retention 220099547 220100307 . + . gene_id "intron_retention.243"; transcript_id "intron_retention.243"; gene_name "ENSG00000163516.9"; flanks "220099548-,220100307^"; structure "0,1^2-"; splice_chain ",220100034^220100196-"; psi_Aligned.out.sorted "0.617239"; chr2 undefined intron_retention 220099547 220100597 . + . gene_id "intron_retention.244"; transcript_id "intron_retention.244"; gene_name "ENSG00000163516.9"; flanks "220099548-,220100597^"; structure "0,1^2-"; splice_chain ",220100307^220100430-"; psi_Aligned.out.sorted "0.312646"; chr2 undefined intron_retention 232258191 232259695 . + . gene_id "intron_retention.245"; transcript_id "intron_retention.245"; gene_name "ENSG00000224376.1"; flanks "232258192-,232259695^"; structure "0,1^2-"; splice_chain ",232258621^232259366-"; psi_Aligned.out.sorted "0.612934"; chr2 undefined intron_retention 232258191 232259695 . + . gene_id "intron_retention.246"; transcript_id "intron_retention.246"; gene_name "ENSG00000224376.1"; flanks "232258192-,232259695^"; structure "0,1^2-"; splice_chain ",232258621^232259492-"; psi_Aligned.out.sorted "0.405970"; chr2 undefined intron_retention 241405474 241407493 . + . gene_id "intron_retention.247"; transcript_id "intron_retention.247"; gene_name "ENSG00000063660.4"; flanks "241405475-,241407493^"; structure "0,1^2-"; splice_chain ",241405786^241405863-"; psi_Aligned.out.sorted "0.535979"; chr2 undefined intron_retention 242610726 242613269 . + . gene_id "intron_retention.248"; transcript_id "intron_retention.248"; gene_name "ENSG00000168397.12"; flanks "242610727-,242613269^"; structure "0,1^2-"; splice_chain ",242610820^242611606-"; psi_Aligned.out.sorted "0.501694"; chr2 undefined intron_retention 242610726 242613269 . + . gene_id "intron_retention.249"; transcript_id "intron_retention.249"; gene_name "ENSG00000168397.12"; flanks "242610727-,242613269^"; structure "0,1^2-"; splice_chain ",242610840^242611606-"; psi_Aligned.out.sorted "0.823017"; chr2 undefined intron_retention 242610726 242613269 . + . gene_id "intron_retention.250"; transcript_id "intron_retention.250"; gene_name "ENSG00000168397.12"; flanks "242610727-,242613269^"; structure "0,1^2-"; splice_chain ",242610856^242611606-"; psi_Aligned.out.sorted "0.603413"; chr2 undefined intron_retention 4007153 4008146 . - . gene_id "intron_retention.251"; transcript_id "intron_retention.251"; gene_name "ENSG00000237401.2"; flanks "4008146-,4007154^"; structure "0,1^2-"; splice_chain ",4007506^4007226-"; psi_Aligned.out.sorted "0.763893"; chr2 undefined intron_retention 4007153 4008146 . - . gene_id "intron_retention.252"; transcript_id "intron_retention.252"; gene_name "ENSG00000237401.2"; flanks "4008146-,4007154^"; structure "0,1^2-"; splice_chain ",4007506^4007364-"; psi_Aligned.out.sorted "0.810570"; chr2 undefined intron_retention 27680707 27681090 . - . gene_id "intron_retention.253"; transcript_id "intron_retention.253"; gene_name "ENSG00000138002.10"; flanks "27681090-,27680708^"; structure "0,1^2-"; splice_chain ",27680993^27680843-"; psi_Aligned.out.sorted "0.310708"; chr2 undefined intron_retention 27706738 27707133 . - . gene_id "intron_retention.254"; transcript_id "intron_retention.254"; gene_name "ENSG00000138002.10"; flanks "27707133-,27706739^"; structure "0,1^2-"; splice_chain ",27707094^27706804-"; psi_Aligned.out.sorted "0.405999"; chr2 undefined intron_retention 46840832 46842324 . - . gene_id "intron_retention.255"; transcript_id "intron_retention.255"; gene_name "ENSG00000151665.8"; flanks "46842324-,46840833^"; structure "0,1^2-"; splice_chain ",46842076^46840924-"; psi_Aligned.out.sorted "0.425789"; chr2 undefined intron_retention 61719701 61720188 . - . gene_id "intron_retention.256"; transcript_id "intron_retention.256"; gene_name "ENSG00000082898.12"; flanks "61720188-,61719702^"; structure "0,1^2-"; splice_chain ",61720050^61719883-"; psi_Aligned.out.sorted "0.613446"; chr2 undefined intron_retention 79362628 79363202 . - . gene_id "intron_retention.258"; transcript_id "intron_retention.258"; gene_name "ENSG00000204787.4"; flanks "79363202-,79362629^"; structure "0,1^2-"; splice_chain ",79363091^79362889-"; psi_Aligned.out.sorted "0.316471"; chr2 undefined intron_retention 79362628 79364053 . - . gene_id "intron_retention.259"; transcript_id "intron_retention.259"; gene_name "ENSG00000204787.4"; flanks "79364053-,79362629^"; structure "0,1^2-"; splice_chain ",79363916^79363202-"; psi_Aligned.out.sorted "0.193932"; chr2 undefined intron_retention 88874183 88874964 . - . gene_id "intron_retention.261"; transcript_id "intron_retention.261"; gene_name "ENSG00000172071.7"; flanks "88874964-,88874184^"; structure "0,1^2-"; splice_chain ",88874879^88874595-"; psi_Aligned.out.sorted "0.553202"; chr2 undefined intron_retention 110882795 110883258 . - . gene_id "intron_retention.262"; transcript_id "intron_retention.262"; gene_name "ENSG00000144061.8"; flanks "110883258-,110882796^"; structure "0,1^2-"; splice_chain ",110883214^110882900-"; psi_Aligned.out.sorted "0.781867"; chr2 undefined intron_retention 177042438 177043012 . - . gene_id "intron_retention.264"; transcript_id "intron_retention.264"; gene_name "ENSG00000224189.2"; flanks "177043012-,177042439^"; structure "0,1^2-"; splice_chain ",177042731^177042549-"; psi_Aligned.out.sorted "0.475439"; chr2 undefined intron_retention 177042438 177043012 . - . gene_id "intron_retention.265"; transcript_id "intron_retention.265"; gene_name "ENSG00000224189.2"; flanks "177043012-,177042439^"; structure "0,1^2-"; splice_chain ",177042743^177042549-"; psi_Aligned.out.sorted "0.867207"; chr2 undefined intron_retention 242437649 242438199 . - . gene_id "intron_retention.273"; transcript_id "intron_retention.273"; gene_name "ENSG00000115694.10"; flanks "242438199-,242437650^"; structure "0,1^2-"; splice_chain ",242438054^242437764-"; psi_Aligned.out.sorted "0.307663"; chr20 undefined intron_retention 2843224 2843580 . + . gene_id "intron_retention.274"; transcript_id "intron_retention.274"; gene_name "ENSG00000215305.5"; flanks "2843225-,2843580^"; structure "0,1^2-"; splice_chain ",2843356^2843453-"; psi_Aligned.out.sorted "0.253158"; chr20 undefined intron_retention 2844594 2844933 . + . gene_id "intron_retention.275"; transcript_id "intron_retention.275"; gene_name "ENSG00000215305.5"; flanks "2844595-,2844933^"; structure "0,1^2-"; splice_chain ",2844729^2844825-"; psi_Aligned.out.sorted "0.727168"; chr20 undefined intron_retention 33589047 33589329 . + . gene_id "intron_retention.276"; transcript_id "intron_retention.276"; gene_name "ENSG00000078814.11"; flanks "33589048-,33589329^"; structure "0,1^2-"; splice_chain ",33589152^33589234-"; psi_Aligned.out.sorted "0.394480"; chr20 undefined intron_retention 33589750 33590240 . + . gene_id "intron_retention.278"; transcript_id "intron_retention.278"; gene_name "ENSG00000078814.11"; flanks "33589751-,33590240^"; structure "0,1^2-"; splice_chain ",33589888^33589980-"; psi_Aligned.out.sorted "0.427019"; chr22 undefined intron_retention 20748404 20748952 . + . gene_id "intron_retention.279"; transcript_id "intron_retention.279"; gene_name "ENSG00000185252.13"; flanks "20748405-,20748952^"; structure "0,1^2-"; splice_chain ",20748624^20748853-"; psi_Aligned.out.sorted "0.941884"; chr22 undefined intron_retention 45204186 45204612 . + . gene_id "intron_retention.280"; transcript_id "intron_retention.280"; gene_name "ENSG00000241484.5"; flanks "45204187-,45204612^"; structure "0,1^2-"; splice_chain ",45204318^45204552-"; psi_Aligned.out.sorted "0.756331"; chr22 undefined intron_retention 21829499 21831053 . - . gene_id "intron_retention.284"; transcript_id "intron_retention.284"; gene_name "ENSG00000183506.12"; flanks "21831053-,21829500^"; structure "0,1^2-"; splice_chain ",21830933^21830449-"; psi_Aligned.out.sorted "0.395907"; chr22 undefined intron_retention 51009586 51009968 . - . gene_id "intron_retention.287"; transcript_id "intron_retention.287"; gene_name "ENSG00000205560.8"; flanks "51009968-,51009587^"; structure "0,1^2-"; splice_chain ",51009804^51009721-"; psi_Aligned.out.sorted "0.367500"; chr22 undefined intron_retention 51014964 51015463 . - . gene_id "intron_retention.288"; transcript_id "intron_retention.288"; gene_name "ENSG00000205560.8"; flanks "51015463-,51014965^"; structure "0,1^2-"; splice_chain ",51015286^51015022-"; psi_Aligned.out.sorted "0.930072"; chr22 undefined intron_retention 51014964 51015463 . - . gene_id "intron_retention.289"; transcript_id "intron_retention.289"; gene_name "ENSG00000205560.8"; flanks "51015463-,51014965^"; structure "0,1^2-"; splice_chain ",51015286^51015066-"; psi_Aligned.out.sorted "0.683622"; chr22 undefined intron_retention 51018618 51018845 . - . gene_id "intron_retention.290"; transcript_id "intron_retention.290"; gene_name "ENSG00000100288.15"; flanks "51018845-,51018619^"; structure "0,1^2-"; splice_chain ",51018787^51018700-"; psi_Aligned.out.sorted "0.573501"; chr22 undefined intron_retention 51020677 51021428 . - . gene_id "intron_retention.291"; transcript_id "intron_retention.291"; gene_name "ENSG00000100288.15"; flanks "51021428-,51020678^"; structure "0,1^2-"; splice_chain ",51020987^51020786-"; psi_Aligned.out.sorted "0.763680"; chr3 undefined intron_retention 8787211 8788451 . + . gene_id "intron_retention.292"; transcript_id "intron_retention.292"; gene_name "ENSG00000182533.6"; flanks "8787212-,8788451^"; structure "0,1^2-"; splice_chain ",8787559^8787656-"; psi_Aligned.out.sorted "0.636280"; chr3 undefined intron_retention 13975635 13978444 . + . gene_id "intron_retention.293"; transcript_id "intron_retention.293"; gene_name "ENSG00000250439.3"; flanks "13975636-,13978444^"; structure "0,1^2-"; splice_chain ",13976987^13977418-"; psi_Aligned.out.sorted "0.501417"; chr3 undefined intron_retention 51749077 51750153 . + . gene_id "intron_retention.299"; transcript_id "intron_retention.299"; gene_name "ENSG00000164082.10"; flanks "51749078-,51750153^"; structure "0,1^2-"; splice_chain ",51749199^51750034-"; psi_Aligned.out.sorted "0.990453"; chr3 undefined intron_retention 97662069 97663807 . + . gene_id "intron_retention.300"; transcript_id "intron_retention.300"; gene_name "ENSG00000080200.5"; flanks "97662070-,97663807^"; structure "0,1^2-"; splice_chain ",97662414^97663678-"; psi_Aligned.out.sorted "0.582839"; chr3 undefined intron_retention 119207775 119209565 . + . gene_id "intron_retention.301"; transcript_id "intron_retention.301"; gene_name "ENSG00000163389.6"; flanks "119207776-,119209565^"; structure "0,1^2-"; splice_chain ",119207834^119209398-"; psi_Aligned.out.sorted "0.280309"; chr3 undefined intron_retention 33438236 33438627 . - . gene_id "intron_retention.302"; transcript_id "intron_retention.302"; gene_name "ENSG00000153560.7"; flanks "33438627-,33438237^"; structure "0,1^2-"; splice_chain ",33438537^33438370-"; psi_Aligned.out.sorted "0.591216"; chr3 undefined intron_retention 46964818 46965158 . - . gene_id "intron_retention.305"; transcript_id "intron_retention.305"; gene_name "ENSG00000160799.7"; flanks "46965158-,46964819^"; structure "0,1^2-"; splice_chain ",46965097^46964853-"; psi_Aligned.out.sorted "0.272189"; chr3 undefined intron_retention 49460378 49462307 . - . gene_id "intron_retention.307"; transcript_id "intron_retention.307"; gene_name "ENSG00000145029.7"; flanks "49462307-,49460379^"; structure "0,1^2-"; splice_chain ",49461508^49460996-"; psi_Aligned.out.sorted "0.871591"; chr3 undefined intron_retention 49462381 49462871 . - . gene_id "intron_retention.308"; transcript_id "intron_retention.308"; gene_name "ENSG00000145029.7"; flanks "49462871-,49462382^"; structure "0,1^2-"; splice_chain ",49462800^49462486-"; psi_Aligned.out.sorted "0.390070"; chr3 undefined intron_retention 49462381 49462871 . - . gene_id "intron_retention.309"; transcript_id "intron_retention.309"; gene_name "ENSG00000145029.7"; flanks "49462871-,49462382^"; structure "0,1^2-"; splice_chain ",49462800^49462579-"; psi_Aligned.out.sorted "0.862475"; chr3 undefined intron_retention 57582800 57583135 . - . gene_id "intron_retention.310"; transcript_id "intron_retention.310"; gene_name "ENSG00000168374.6"; flanks "57583135-,57582801^"; structure "0,1^2-"; splice_chain ",57583059^57582950-"; psi_Aligned.out.sorted "0.925381"; chr3 undefined intron_retention 73431583 73434081 . - . gene_id "intron_retention.311"; transcript_id "intron_retention.311"; gene_name "ENSG00000121440.10"; flanks "73434081-,73431584^"; structure "0,1^2-"; splice_chain ",73433800^73432956-"; psi_Aligned.out.sorted "0.801467"; chr3 undefined intron_retention 124944404 124952783 . - . gene_id "intron_retention.312"; transcript_id "intron_retention.312"; gene_name "ENSG00000163848.14"; flanks "124952783-,124944405^"; structure "0,1^2-"; splice_chain ",124951953^124951498-"; psi_Aligned.out.sorted "0.858916"; chr3 undefined intron_retention 125725197 125726068 . - . gene_id "intron_retention.313"; transcript_id "intron_retention.313"; gene_name "ENSG00000114544.11"; flanks "125726068-,125725198^"; structure "0,1^2-"; splice_chain ",125725957^125725407-"; psi_Aligned.out.sorted "0.689146"; chr3 undefined intron_retention 125725197 125726068 . - . gene_id "intron_retention.314"; transcript_id "intron_retention.314"; gene_name "ENSG00000114544.11"; flanks "125726068-,125725198^"; structure "0,1^2-"; splice_chain ",125725560^125725471-"; psi_Aligned.out.sorted "0.905061"; chr4 undefined intron_retention 657558 658010 . + . gene_id "intron_retention.315"; transcript_id "intron_retention.315"; gene_name "ENSG00000133256.8"; flanks "657559-,658010^"; structure "0,1^2-"; splice_chain ",657659^657903-"; psi_Aligned.out.sorted "0.254087"; chr4 undefined intron_retention 2932287 2932877 . - . gene_id "intron_retention.316"; transcript_id "intron_retention.316"; gene_name "ENSG00000109736.10"; flanks "2932877-,2932288^"; structure "0,1^2-"; splice_chain ",2932788^2932680-"; psi_Aligned.out.sorted "0.272984"; chr4 undefined intron_retention 3948870 3949947 . - . gene_id "intron_retention.317"; transcript_id "intron_retention.317"; gene_name "ENSG00000251669.1"; flanks "3949947-,3948871^"; structure "0,1^2-"; splice_chain ",3949817^3949734-"; psi_Aligned.out.sorted "0.290420"; chr5 undefined intron_retention 54459882 54460752 . + . gene_id "intron_retention.319"; transcript_id "intron_retention.319"; gene_name "ENSG00000164294.9"; flanks "54459883-,54460752^"; structure "0,1^2-"; splice_chain ",54460007^54460428-"; psi_Aligned.out.sorted "0.837005"; chr5 undefined intron_retention 134181702 134182553 . + . gene_id "intron_retention.320"; transcript_id "intron_retention.320"; gene_name "ENSG00000181904.8"; flanks "134181703-,134182553^"; structure "0,1^2-"; splice_chain ",134181902^134182353-"; psi_Aligned.out.sorted "0.542291"; chr5 undefined intron_retention 134190587 134194799 . + . gene_id "intron_retention.321"; transcript_id "intron_retention.321"; gene_name "ENSG00000181904.8"; flanks "134190588-,134194799^"; structure "0,1^2-"; splice_chain ",134190852^134193047-"; psi_Aligned.out.sorted "0.312229"; chr5 undefined intron_retention 134190587 134194799 . + . gene_id "intron_retention.322"; transcript_id "intron_retention.322"; gene_name "ENSG00000181904.8"; flanks "134190588-,134194799^"; structure "0,1^2-"; splice_chain ",134191017^134193047-"; psi_Aligned.out.sorted "0.727114"; chr5 undefined intron_retention 137517110 137517200 . + . gene_id "intron_retention.323"; transcript_id "intron_retention.323"; gene_name "ENSG00000112984.7"; flanks "137517111-,137517200^"; structure "0,1^2-"; splice_chain ",137517137^137517192-"; psi_Aligned.out.sorted "0.989154"; chr5 undefined intron_retention 140705776 140708924 . + . gene_id "intron_retention.324"; transcript_id "intron_retention.324"; gene_name "ENSG00000272070.1"; flanks "140705777-,140708924^"; structure "0,1^2-"; splice_chain ",140706204^140707337-"; psi_Aligned.out.sorted "0.447455"; chr5 undefined intron_retention 177631507 177632047 . + . gene_id "intron_retention.325"; transcript_id "intron_retention.325"; gene_name "ENSG00000197451.6"; flanks "177631508-,177632047^"; structure "0,1^2-"; splice_chain ",177631741^177631816-"; psi_Aligned.out.sorted "0.233062"; chr5 undefined intron_retention 2745958 2747730 . - . gene_id "intron_retention.326"; transcript_id "intron_retention.326"; gene_name "ENSG00000170561.8"; flanks "2747730-,2745959^"; structure "0,1^2-"; splice_chain ",2747655^2746900-"; psi_Aligned.out.sorted "0.754920"; chr5 undefined intron_retention 54566239 54566534 . - . gene_id "intron_retention.327"; transcript_id "intron_retention.327"; gene_name "ENSG00000067248.5"; flanks "54566534-,54566240^"; structure "0,1^2-"; splice_chain ",54566406^54566315-"; psi_Aligned.out.sorted "0.443234"; chr5 undefined intron_retention 64885506 64887329 . - . gene_id "intron_retention.328"; transcript_id "intron_retention.328"; gene_name "ENSG00000113595.10"; flanks "64887329-,64885507^"; structure "0,1^2-"; splice_chain ",64887275^64886129-"; psi_Aligned.out.sorted "0.505596"; chr5 undefined intron_retention 64885506 64887775 . - . gene_id "intron_retention.329"; transcript_id "intron_retention.329"; gene_name "ENSG00000113595.10"; flanks "64887775-,64885507^"; structure "0,1^2-"; splice_chain ",64887670^64887329-"; psi_Aligned.out.sorted "0.651469"; chr5 undefined intron_retention 64885506 64887775 . - . gene_id "intron_retention.330"; transcript_id "intron_retention.330"; gene_name "ENSG00000113595.10"; flanks "64887775-,64885507^"; structure "0,1^2-"; splice_chain ",64887699^64887329-"; psi_Aligned.out.sorted "0.588851"; chr5 undefined intron_retention 141052579 141053037 . - . gene_id "intron_retention.331"; transcript_id "intron_retention.331"; gene_name "ENSG00000120318.11"; flanks "141053037-,141052580^"; structure "0,1^2-"; splice_chain ",141052968^141052700-"; psi_Aligned.out.sorted "0.264096"; chr5 undefined intron_retention 149786443 149786887 . - . gene_id "intron_retention.332"; transcript_id "intron_retention.332"; gene_name "ENSG00000019582.10"; flanks "149786887-,149786444^"; structure "0,1^2-"; splice_chain ",149786715^149786523-"; psi_Aligned.out.sorted "0.225192"; chr5 undefined intron_retention 178029664 178030935 . - . gene_id "intron_retention.333"; transcript_id "intron_retention.333"; gene_name "ENSG00000113240.8"; flanks "178030935-,178029665^"; structure "0,1^2-"; splice_chain ",178030845^178030758-"; psi_Aligned.out.sorted "0.533502"; chr5 undefined intron_retention 178029664 178032383 . - . gene_id "intron_retention.334"; transcript_id "intron_retention.334"; gene_name "ENSG00000113240.8"; flanks "178032383-,178029665^"; structure "0,1^2-"; splice_chain ",178032304^178030935-"; psi_Aligned.out.sorted "0.467173"; chr5 undefined intron_retention 178044344 178045779 . - . gene_id "intron_retention.335"; transcript_id "intron_retention.335"; gene_name "ENSG00000113240.8"; flanks "178045779-,178044345^"; structure "0,1^2-"; splice_chain ",178045557^178044435-"; psi_Aligned.out.sorted "0.271300"; chr6 undefined intron_retention 2988661 2989967 . + . gene_id "intron_retention.336"; transcript_id "intron_retention.336"; gene_name "ENSG00000244041.3"; flanks "2988662-,2989967^"; structure "0,1^2-"; splice_chain ",2988943^2989762-"; psi_Aligned.out.sorted "0.529103"; chr6 undefined intron_retention 2988661 2990582 . + . gene_id "intron_retention.337"; transcript_id "intron_retention.337"; gene_name "ENSG00000244041.3"; flanks "2988662-,2990582^"; structure "0,1^2-"; splice_chain ",2989967^2990103-"; psi_Aligned.out.sorted "0.814815"; chr6 undefined intron_retention 31937056 31937532 . + . gene_id "intron_retention.340"; transcript_id "intron_retention.340"; gene_name "ENSG00000204351.7"; flanks "31937057-,31937532^"; structure "0,1^2-"; splice_chain ",31937093^31937292-"; psi_Aligned.out.sorted "0.384963"; chr6 undefined intron_retention 31937056 31937532 . + . gene_id "intron_retention.341"; transcript_id "intron_retention.341"; gene_name "ENSG00000204351.7"; flanks "31937057-,31937532^"; structure "0,1^2-"; splice_chain ",31937197^31937292-"; psi_Aligned.out.sorted "0.624590"; chr6 undefined intron_retention 33243573 33243843 . + . gene_id "intron_retention.342"; transcript_id "intron_retention.342"; gene_name "ENSG00000231500.2"; flanks "33243574-,33243843^"; structure "0,1^2-"; splice_chain ",33243660^33243742-"; psi_Aligned.out.sorted "0.332938"; chr6 undefined intron_retention 46644119 46645930 . + . gene_id "intron_retention.343"; transcript_id "intron_retention.343"; gene_name "ENSG00000153291.11"; flanks "46644120-,46645930^"; structure "0,1^2-"; splice_chain ",46644480^46645348-"; psi_Aligned.out.sorted "0.214185"; chr6 undefined intron_retention 112375274 112375608 . + . gene_id "intron_retention.344"; transcript_id "intron_retention.344"; gene_name "ENSG00000112761.14"; flanks "112375275-,112375608^"; structure "0,1^2-"; splice_chain ",112375364^112375538-"; psi_Aligned.out.sorted "0.460032"; chr6 undefined intron_retention 112375274 112375608 . + . gene_id "intron_retention.345"; transcript_id "intron_retention.345"; gene_name "ENSG00000112761.14"; flanks "112375275-,112375608^"; structure "0,1^2-"; splice_chain ",112375373^112375538-"; psi_Aligned.out.sorted "0.881992"; chr6 undefined intron_retention 161529774 161530073 . + . gene_id "intron_retention.346"; transcript_id "intron_retention.346"; gene_name "ENSG00000085511.15"; flanks "161529775-,161530073^"; structure "0,1^2-"; splice_chain ",161529891^161529983-"; psi_Aligned.out.sorted "0.262062"; chr6 undefined intron_retention 31938119 31938602 . - . gene_id "intron_retention.349"; transcript_id "intron_retention.349"; gene_name "ENSG00000204348.5"; flanks "31938602-,31938120^"; structure "0,1^2-"; splice_chain ",31938370^31938155-"; psi_Aligned.out.sorted "0.896610"; chr6 undefined intron_retention 43480177 43480612 . - . gene_id "intron_retention.351"; transcript_id "intron_retention.351"; gene_name "ENSG00000137207.7"; flanks "43480612-,43480178^"; structure "0,1^2-"; splice_chain ",43480499^43480301-"; psi_Aligned.out.sorted "0.312655"; chr6 undefined intron_retention 43480177 43480836 . - . gene_id "intron_retention.352"; transcript_id "intron_retention.352"; gene_name "ENSG00000137207.7"; flanks "43480836-,43480178^"; structure "0,1^2-"; splice_chain ",43480807^43480612-"; psi_Aligned.out.sorted "0.266730"; chr6 undefined intron_retention 43480806 43481189 . - . gene_id "intron_retention.353"; transcript_id "intron_retention.353"; gene_name "ENSG00000137207.7"; flanks "43481189-,43480807^"; structure "0,1^2-"; splice_chain ",43481097^43480836-"; psi_Aligned.out.sorted "0.913372"; chr6 undefined intron_retention 43480177 43481189 . - . gene_id "intron_retention.354"; transcript_id "intron_retention.354"; gene_name "ENSG00000137207.7"; flanks "43481189-,43480178^"; structure "0,1^2-"; splice_chain ",43481097^43480938-"; psi_Aligned.out.sorted "0.332618"; chr7 undefined intron_retention 6639459 6639987 . + . gene_id "intron_retention.355"; transcript_id "intron_retention.355"; gene_name "ENSG00000146576.8"; flanks "6639460-,6639987^"; structure "0,1^2-"; splice_chain ",6639523^6639758-"; psi_Aligned.out.sorted "0.936014"; chr7 undefined intron_retention 44250440 44250723 . + . gene_id "intron_retention.356"; transcript_id "intron_retention.356"; gene_name "ENSG00000106636.3"; flanks "44250441-,44250723^"; structure "0,1^2-"; splice_chain ",44250530^44250622-"; psi_Aligned.out.sorted "0.380350"; chr7 undefined intron_retention 75043917 75044301 . + . gene_id "intron_retention.359"; transcript_id "intron_retention.359"; gene_name "ENSG00000223705.5"; flanks "75043918-,75044301^"; structure "0,1^2-"; splice_chain ",75044076^75044163-"; psi_Aligned.out.sorted "0.692769"; chr7 undefined intron_retention 100771673 100771945 . + . gene_id "intron_retention.360"; transcript_id "intron_retention.360"; gene_name "ENSG00000106366.7"; flanks "100771674-,100771945^"; structure "0,1^2-"; splice_chain ",100771764^100771810-"; psi_Aligned.out.sorted "0.487578"; chr7 undefined intron_retention 148990467 148990853 . + . gene_id "intron_retention.361"; transcript_id "intron_retention.361"; gene_name "ENSG00000244560.2"; flanks "148990468-,148990853^"; structure "0,1^2-"; splice_chain ",148990583^148990842-"; psi_Aligned.out.sorted "0.909952"; chr7 undefined intron_retention 107569508 107570422 . - . gene_id "intron_retention.362"; transcript_id "intron_retention.362"; gene_name "ENSG00000091136.9"; flanks "107570422-,107569509^"; structure "0,1^2-"; splice_chain ",107569857^107569650-"; psi_Aligned.out.sorted "0.646498"; chr7 undefined intron_retention 127254933 127255780 . - . gene_id "intron_retention.363"; transcript_id "intron_retention.363"; gene_name "ENSG00000106331.10"; flanks "127255780-,127254934^"; structure "0,1^2-"; splice_chain ",127255455^127255149-"; psi_Aligned.out.sorted "0.757923"; chr7 undefined intron_retention 156471770 156473268 . - . gene_id "intron_retention.364"; transcript_id "intron_retention.364"; gene_name "ENSG00000105983.15"; flanks "156473268-,156471771^"; structure "0,1^2-"; splice_chain ",156473137^156472000-"; psi_Aligned.out.sorted "0.737402"; chr8 undefined intron_retention 103572679 103573216 . + . gene_id "intron_retention.365"; transcript_id "intron_retention.365"; gene_name "ENSG00000155087.3"; flanks "103572680-,103573216^"; structure "0,1^2-"; splice_chain ",103572800^103572989-"; psi_Aligned.out.sorted "0.865325"; chr8 undefined intron_retention 99057574 99057776 . - . gene_id "intron_retention.366"; transcript_id "intron_retention.366"; gene_name "ENSG00000156482.6"; flanks "99057776-,99057575^"; structure "0,1^2-"; splice_chain ",99057736^99057627-"; psi_Aligned.out.sorted "0.302448"; chr9 undefined intron_retention 11986 12340 . + . gene_id "intron_retention.367"; transcript_id "intron_retention.367"; gene_name "ENSG00000236875.2"; flanks "11987-,12340^"; structure "0,1^2-"; splice_chain ",12191^12293-"; psi_Aligned.out.sorted "0.425047"; chr9 undefined intron_retention 35074923 35075322 . - . gene_id "intron_retention.368"; transcript_id "intron_retention.368"; gene_name "ENSG00000221829.5"; flanks "35075322-,35074924^"; structure "0,1^2-"; splice_chain ",35075276^35075079-"; psi_Aligned.out.sorted "0.241953"; chr9 undefined intron_retention 125627627 125627936 . - . gene_id "intron_retention.371"; transcript_id "intron_retention.371"; gene_name "ENSG00000056586.11"; flanks "125627936-,125627628^"; structure "0,1^2-"; splice_chain ",125627903^125627820-"; psi_Aligned.out.sorted "0.391627"; chr9 undefined intron_retention 131483147 131483781 . - . gene_id "intron_retention.372"; transcript_id "intron_retention.372"; gene_name "ENSG00000160446.14"; flanks "131483781-,131483148^"; structure "0,1^2-"; splice_chain ",131483704^131483547-"; psi_Aligned.out.sorted "0.763194"; chrX undefined intron_retention 24380877 24383495 . + . gene_id "intron_retention.373"; transcript_id "intron_retention.373"; gene_name "ENSG00000223731.1"; flanks "24380878-,24383495^"; structure "0,1^2-"; splice_chain ",24382348^24382541-"; psi_Aligned.out.sorted "0.501148"; chrX undefined intron_retention 2404454 2408813 . - . gene_id "intron_retention.375"; transcript_id "intron_retention.375"; gene_name "ENSG00000214717.5"; flanks "2408813-,2404455^"; structure "0,1^2-"; splice_chain ",2406829^2405743-"; psi_Aligned.out.sorted "0.433274"; chrX undefined intron_retention 19930977 19932544 . - . gene_id "intron_retention.378"; transcript_id "intron_retention.378"; gene_name "ENSG00000173681.12"; flanks "19932544-,19930978^"; structure "0,1^2-"; splice_chain ",19932469^19932386-"; psi_Aligned.out.sorted "0.785040"; chrX undefined intron_retention 134290460 134291428 . - . gene_id "intron_retention.381"; transcript_id "intron_retention.381"; gene_name "ENSG00000169551.8"; flanks "134291428-,134290461^"; structure "0,1^2-"; splice_chain ",134291241^134290953-"; psi_Aligned.out.sorted "0.758084";